ALLs.chr22
(Package: ChromHeatMap) :
Chromosome 22 subset of ALL data for ALL1/AF4 and E2A/PBX1
This is a greatly reduced subset of the Chiaretti et al. ALL data set (available in its entirety as the Bioconductor ALL package). The data in this subset consist of microarrays from 15 different individuals with acute lymphoblastic leukemia (ALL). The data are further restricted to chromosome 22 only. This data set is intended for demonstration purposes only.
chrdata
(Package: ChromHeatMap) :
The ALLs.chr22 ExpressionSet, reformatted as a ChrStrandData object
This is a greatly reduced subset of the Chiaretti et al. ALL data set (available in its entirety as the Bioconductor ALL package). The data in this subset consist of microarrays from 15 different individuals with acute lymphoblastic leukemia (ALL). The data are further restricted to chromosome 22 only. This data set is intended for demonstration purposes only. See the documentation for makeChrStrandData for a description of the ChrStrandData object format. This format directly associates the ExpressionSet data with chromosome location, speeding up retrieval of data during heat map plotting.
This data set contains cytoband information for a range of species, taken directly from the UCSC genome annotation database. This data set is designed to be easily extendable to cover new species.