MBttest

Package: MBttest
Type: Package
Title: Multiple Beta t-Tests
Version: 1.0.0
Date: 2015-01-04
Author: Yuan-De Tan
Maintainer: Yuan-De Tan <tanyuande@gmail.com>
Description: MBttest method was developed from beta t-test method of
Baggerly et al(2003). Compared to baySeq (Hard castle and Kelly
2010), DESeq (Anders and Huber 2010) and exact test (Robinson
and Smyth 2007, 2008) and the GLM of McCarthy et al(2012),
MBttest is of high work efficiency,that is, it has high power,
high conservativeness of FDR estimation and high stability.
MBttest is suit- able to transcriptomic data, tag data, SAGE
data (count data) from small samples or a few replicate
libraries. It can be used to identify genes, mRNA isoforms or
tags differentially expressed between two conditions.
License: GPL-3
Depends: R (>= 3.3.0), stats, gplots, gtools, graphics, base,
utils, grDevices
Suggests: BiocStyle, BiocGenerics
LazyLoad: yes
biocViews: Sequencing, DifferentialExpression, MultipleComparison,
SAGE, GeneExpression, Transcription,
AlternativeSplicing,Coverage, DifferentialSplicing
NeedsCompilation: no
Packaged: 2016-05-04 06:49:05 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'MBttest' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'MBttest'
    finding HTML links ... done
    MBttest-package                         html  
    betaparametVP                           html  
    betaparametab                           html  
    betaparametw                            html  
    betattest                               html  
    dat                                     html  
    jkttcell                                html  
    maplot                                  html  
    mbetattest                              html  
    mtprocedure                             html  
    mtpvadjust                              html  
    myheatmap                               html  
    oddratio                                html  
    pratio                                  html  
    simulat                                 html  
    skjt                                    html  
    smbetattest                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (MBttest)
Making 'packages.html' ... done