MLInterfaces

Package: MLInterfaces
Title: Uniform interfaces to R machine learning procedures for data in
Bioconductor containers
Version: 1.52.0
Author: Vince Carey <stvjc@channing.harvard.edu>, Robert Gentleman,
Jess Mar, and contributions from Jason Vertrees
<jv@cs.dartmouth.edu> and Laurent Gatto <lg390@cam.ac.uk>
Description: This package provides uniform interfaces to machine
learning code for data in R and Bioconductor containers.
Maintainer: V. Carey <stvjc@channing.harvard.edu>
License: LGPL
Depends: R (>= 2.9), methods, BiocGenerics (>= 0.13.11), Biobase,
annotate, cluster
Imports: gdata, pls, sfsmisc, MASS, rpart, rda, genefilter, fpc, ggvis,
shiny, rgl, gbm, RColorBrewer, hwriter, threejs (>= 0.2.2),
mlbench, stats4
Suggests: class, e1071, ipred, randomForest, gpls, pamr, nnet, ALL,
hgu95av2.db, som, hu6800.db, lattice, caret (>= 5.07),
golubEsets, ada, keggorthology, kernlab, mboost, party
Enhances: parallel
LazyLoad: yes
Collate: AllClasses.R RAB.R pplot.R varImp.R xval.R MLearn.R
MLIConverters.R MLIPredicters.R localBridge.R
methods-classifierOutput.R methods-clusteringOutput.R
methods-learnerSchema.R schemaInterfaces.R featSel.R partPlot.R
clDesign.R plsdaI.R performance-analytics.R hcw.R mlw.R pv.R
plspinHcube.R
biocViews: Classification, Clustering
NeedsCompilation: no
Packaged: 2016-05-04 02:42:37 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'MLInterfaces' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'MLInterfaces'
    finding HTML links ... done
    MLIntInternals                          html  
    MLearn-new                              html  
    RAB                                     html  
    balKfold.xvspec                         html  
    classifierOutput-class                  html  
    clusteringOutput-class                  html  
    confuMat-methods                        html  
    confuTab                                html  
    fs.absT                                 html  
    fsHistory                               html  
    hclustWidget                            html  
Rd warning: /tmp/Rtmp53v5rf/R.INSTALL77f62f376e6d/MLInterfaces/man/hclustWidget.Rd:35: missing file link 'ExpressionSet-class'
    learnerSchema-class                     html  
    performance-analytics                   html  
    planarPlot-methods                      html  
    plspinHcube                             html  
    predict.classifierOutput                html  
    projectLearnerToGrid                    html  
    projectedLearner-class                  html  
    raboostCont-class                       html  
    varImpStruct-class                      html  
    xvalLoop                                html  
    xvalSpec                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (MLInterfaces)
Making 'packages.html' ... done