procoil

Package: procoil
Type: Package
Title: Prediction of Oligomerization of Coiled Coil Proteins
Version: 2.0.2
Date: 2016-04-12
Depends: R (>= 3.3.0), kebabs
Imports: methods, stats, graphics, S4Vectors, Biostrings, utils
Suggests: knitr
Author: Ulrich Bodenhofer
Maintainer: Ulrich Bodenhofer <bodenhofer@bioinf.jku.at>
Description: The package allows for predicting whether a coiled coil sequence
(amino acid sequence plus heptad register) is more likely to form
a dimer or more likely to form a trimer. Additionally to the
prediction itself, a prediction profile is computed which allows
for determining the strengths to which the individual residues
are indicative for either class. Prediction profiles can also
be visualized as curves or heatmaps.
License: GPL (>= 2)
Collate: AllClasses.R access-methods.R show-methods.R plot-methods.R
predict-methods.R weights-methods.R profile-methods.R
readCCModel.R writeCCModel.R fitted-methods.R heatmap-methods.R
URL: http://www.bioinf.jku.at/software/procoil/
VignetteBuilder: knitr
LazyLoad: yes
LazyData: yes
biocViews: Proteomics, Classification, SupportVectorMachine
NeedsCompilation: no
Packaged: 2016-05-16 02:47:38 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'procoil' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'procoil'
    finding HTML links ... done
    CCModel-FileOps                         html  
    CCModel-class                           html  
    CCProfile-class                         html  
    finding level-2 HTML links ... done

    plot-methods                            html  
    predict-methods                         html  
    procoil-package                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (procoil)
Making 'packages.html' ... done