profileScoreDist

Package: profileScoreDist
Type: Package
Title: Profile score distributions
Version: 1.0.2
Date: 2015-12-09
Author: Paal O. Westermark
Maintainer: Paal O. Westermark <pal-olof.westermark@charite.de>
Description: Regularization and score distributions for position count
matrices.
License: MIT + file LICENSE
biocViews: Software, GeneRegulation, StatisticalMethod
LazyData: TRUE
LinkingTo: Rcpp
Imports: Rcpp, BiocGenerics, methods, graphics
Depends: R (>= 3.3)
Suggests: BiocStyle, knitr, MotifDb
VignetteBuilder: knitr
RoxygenNote: 5.0.1
NeedsCompilation: yes
Packaged: 2016-05-16 05:52:11 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'profileScoreDist' ...
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c profileConvolution.cpp -o profileConvolution.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c profilePosscoreprob.cpp -o profilePosscoreprob.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o profileScoreDist.so RcppExports.o profileConvolution.o profilePosscoreprob.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/profileScoreDist/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'profileScoreDist'
    finding HTML links ... done
    INR                                     html  
    ProfileDist-class                       html  
    backgroundDist                          html  
    computeScoreDist                        html  
    plotDist                                html  
    regularizeMatrix                        html  
    scoreDistCutoffs                        html  
    signalDist                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (profileScoreDist)
Making 'packages.html' ... done