Package: genoPlotR
Type: Package
Title: Plot Publication-Grade Gene and Genome Maps
Version: 0.8.4
Date: 2015-07-02
Author: Lionel Guy <lionel.guy@imbim.uu.se>
URL: http://genoplotr.r-forge.r-project.org/
Depends: R (>= 2.10.0), ade4, grid
Imports: methods
Maintainer: Lionel Guy <lionel.guy@imbim.uu.se>
Description: Draws gene or genome maps and comparisons between these, in a
publication-grade manner. Starting from simple, common files, it will
draw postscript or pdf files that can be sent as such to journals.
License: GPL (>= 2)
LazyLoad: yes
Repository: CRAN
Repository/R-Forge/Project: genoplotr
Repository/R-Forge/Revision: 57
Repository/R-Forge/DateTimeStamp: 2015-07-08 06:51:06
Date/Publication: 2015-07-08 13:21:55
NeedsCompilation: no
Packaged: 2015-07-08 07:05:39 UTC; rforge
Package: DDD
Type: Package
Title: Diversity-Dependent Diversification
Version: 3.2
Date: 2016-2-5
Depends: R (>= 3.0.2), deSolve, ape, ade4
Imports: phytools, subplex, Matrix, expoRkit, SparseM
Author: Rampal S. Etienne & Bart Haegeman
Maintainer: Rampal S. Etienne <r.s.etienne@rug.nl>
License: GPL-3
Description:
Implements maximum likelihood methods based on the diversity-dependent birth-death process to test whether speciation or extinction are diversity-dependent.
See Etienne et al. 2012, Proc. Roy. Soc. B 279: 1300-1309, <DOI:10.1098/rspb.2011.1439>.
Also implements maximum likelihood methods to detect various types of key innovations in the light of diversity-dependence.
See Etienne & Haegeman 2012, Am. Nat. 180: E75-E89, <DOI:10.1086/667574>.
Finally, DDD contains a function to simulate the diversity-dependent process.
NeedsCompilation: no
Packaged: 2016-02-09 08:59:36 UTC; rampa
Repository: CRAN
Date/Publication: 2016-02-09 10:24:37
Package: ENiRG
Type: Package
Title: Ecological Niche in R and GRASS
Version: 1.0
Date: 2016-05-05
Author: Fernando Canovas, Chiara Magliozzi, Jose Antonio Palazon-Ferrando, Frederico Mestre, Mercedes Gonzalez-Wanguemert
Maintainer: Fernando Garcia Canovas <fcgarcia@ualg.pt>
Description: A set of tools for the analysis of ecological niche of species and calculation of habitat suitability maps.
License: GPL (>= 2)
Depends: ade4, miniGUI, raster, sp, rgrass7
Imports: gdata, fgui, tcltk
NeedsCompilation: no
Packaged: 2016-05-05 10:30:16 UTC; fcgarcia
Repository: CRAN
Date/Publication: 2016-05-05 16:03:42
Package: FactoClass
Version: 1.1.2
Date: 2015-08-04
Title: Combination of Factorial Methods and Cluster Analysis
Author: Campo Elias Pardo <cepardot@unal.edu.co>, Pedro Cesar del Campo
<pcdelcampon@unal.edu.co> and Camilo Jose Torres
<cjtorresj@unal.edu.co>, with the contributions from Ivan Diaz
<ildiazm@unal.edu.co>, Mauricio Sadinle
<msadinleg@unal.edu.co>.
Maintainer: Campo Elias Pardo <cepardot@unal.edu.co>
Depends: R (>= 2.7.0), ade4, xtable
Description: Multivariate exploration of a data table with factorial
analysis and cluster methods.
License: GPL (>= 2)
Encoding: latin1
NeedsCompilation: yes
Packaged: 2015-08-05 15:21:34 UTC; UNcepardot
Repository: CRAN
Date/Publication: 2015-08-05 20:05:36
Package: ecospat
Version: 2.0
Date: 2016-05-26
Title: Spatial Ecology Miscellaneous Methods
Authors@R: c(
person("Olivier", "Broennimann", role = "aut", email = "olivier.broennimann@unil.ch"),
person("Valeria", "Di Cola", role = c("cre", "aut"), email = "valeria.dicola@unil.ch"),
person("Blaise", "Petitpierre", role = "ctb"),
person("Frank", "Breiner", role = "ctb"),
person("Manuela", "D`Amen", role = "ctb"),
person("Christophe", "Randin", role = "ctb"),
person("Robin", "Engler", role = "ctb"),
person("Wim", "Hordijk", role = "ctb"),
person("Julien", "Pottier", role = "ctb"),
person("Mirko", "Di Febbraro", role = "ctb"),
person("Loic", "Pellissier", role = "ctb"),
person("Dorothea", "Pio", role = "ctb"),
person("Ruben", "Garcia Mateo", role = "ctb"),
person("Anne", "Dubuis", role = "ctb"),
person("Daniel", "Scherrer", role = "ctb"),
person("Luigi", "Maiorano", role = "ctb"),
person("Achilleas", "Psomas", role = "ctb"),
person("Charlotte", "Ndiribe", role = "ctb"),
person("Nicolas", "Salamin", role = "ctb"),
person("Niklaus", "Zimmermann", role = "ctb"),
person("Antoine", "Guisan", role = "aut", email = "antoine.guisan@unil.ch"))
Author: Olivier Broennimann [aut],
Valeria Di Cola [cre, aut],
Blaise Petitpierre [ctb],
Frank Breiner [ctb],
Manuela D`Amen [ctb],
Christophe Randin [ctb],
Robin Engler [ctb],
Wim Hordijk [ctb],
Julien Pottier [ctb],
Mirko Di Febbraro [ctb],
Loic Pellissier [ctb],
Dorothea Pio [ctb],
Ruben Garcia Mateo [ctb],
Anne Dubuis [ctb],
Daniel Scherrer [ctb],
Luigi Maiorano [ctb],
Achilleas Psomas [ctb],
Charlotte Ndiribe [ctb],
Nicolas Salamin [ctb],
Niklaus Zimmermann [ctb],
Antoine Guisan [aut]
Maintainer: Valeria Di Cola <valeria.dicola@unil.ch>
Depends: ade4 (>= 1.6-2), ape (>= 3.2), gbm (>= 2.1), sp (>= 1.0-15)
Imports: adehabitatHR (>= 0.4.11), adehabitatMA (>= 0.3.8), biomod2 (>=
3.1-64), dismo (>= 0.9-3), ecodist (>= 1.2.9), maptools (>=
0.8-39), randomForest (>= 4.6-7), spatstat (>= 1.37-0), raster
(>= 2.2-31), rms (>= 4.5-0), MigClim (>= 1.6), gtools (>=
3.4.1), PresenceAbsence (>= 1.1.9), methods (>= 3.1.1), doParallel (>= 1.0.10), foreach (>= 1.4.3), iterators (>=
1.0.8), parallel
Suggests: rgdal (>= 0.8-16), rJava (>= 0.9-6), XML (>= 3.98-1.1)
LazyData: true
URL:
http://www.unil.ch/ecospat/home/menuguid/ecospat-resources/tools.html
Description: Colection of R functions and data sets for the support of spatial ecology analyses with a focus on pre-, core and post- modelling analyses of species distribution, niche quantification and community assembly., written by current and former members and collaborators of the ecospat group of Antoine Guisan, Department of Ecology and Evolution (DEE) & Institute of Earth Surface Dynamics (IDYST), University of Lausanne, Switzerland.
License: GPL
NeedsCompilation: no
Packaged: 2016-05-26 13:46:13 UTC; vdicolab
Repository: CRAN
Date/Publication: 2016-05-26 17:29:23
Package: FD
Type: Package
Title: Measuring functional diversity (FD) from multiple traits, and
other tools for functional ecology
Version: 1.0-12
Date: 2014-19-08
Author: Etienne Laliberté, Pierre Legendre, Bill Shipley
Maintainer: Etienne Laliberté <etiennelaliberte@gmail.com>
Description: FD is a package to compute different multidimensional FD indices. It implements a distance-based framework to measure FD that allows any number and type of functional traits, and can also consider species relative abundances. It also contains other useful tools for functional ecology.
License: GPL-2
LazyLoad: yes
LazyData: yes
Depends: ade4, ape, geometry, vegan
Encoding: latin1
Packaged: 2014-08-19 09:49:14 UTC; 00073639
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2014-08-19 13:42:17
Package: VARSEDIG
Version: 1.1
Date: 2016-01-08
Title: An Algorithm for Morphometric Characters Selection and
Statistical Validation in Morphological Taxonomy
Author: Cástor Guisande González
Maintainer: Cástor Guisande González <castor@uvigo.es>
Description: An algorithm which identifies the morphometric features that significantly discriminate two taxa and validates the morphological distinctness between them via a Monte-Carlo test, polar coordinates and overlap of the area under the density curve.
License: GPL (>= 2)
Encoding: latin1
Imports: IDPmisc
Depends: R (>= 3.1.1), adehabitatHS, kulife, MASS, car, stats, utils, grDevices, graphics, ade4
Repository: CRAN
Packaged: 2016-01-08 15:57:17 UTC; castor
NeedsCompilation: no
Date/Publication: 2016-01-08 18:37:27
providing 
.