Last data update: 2014.03.03

 R: boxplotMIMOSAResultList
boxplotMIMOSAResultListR Documentation

boxplotMIMOSAResultList

Description

Boxplots of MIMOSA

Usage

boxplotMIMOSAResultList(data, title = "A Boxplot", x_axis_category = NULL,
  cofactor = 5000, line = TRUE, threshold = 0.005)

Arguments

data

MIMOSAResultList

title

character Title of the plot.

x_axis_category

name the column of the phenoData frame for the x-axis of the boxplots.

cofactor

integer cofactor of the arcsinhTransform for the y axis.

line

logical whether or not to connect points from the same subject

threshold

numeric the FDR threshold (q-value) at which to classify responders as a separate category.

Details

Generate boxplots for MIMOSA positivity calls.

Value

ggplot object.

Author(s)

Greg Finak

Results


Created & Maintained by Osamu Ogasawara (osamu.ogasawara@gmail.com) and IMSBIO