Last data update: 2014.03.03

R: Visualization of large biological networks.
plot.netbiovR Documentation

Visualization of large biological networks.

Description

Plots netbiov object

Usage

## S3 method for class 'netbiov'
plot(x, ...)
## S3 method for class 'netbiov'
tkplot(x, ...) 

Arguments

x

x is a netbiov object contains different properties of graph

...

... parameter for other inputs.

Value

returns invisible 'NULL' value.

Author(s)

Shailesh Tripathi, Frank Emmert-Streib

References

http://bio-complexity.com/

Examples

  data("PPI_Athalina")
  id <- plot.modules(g1)
  plot.netbiov(id)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(netbiov)
Loading required package: igraph

Attaching package: 'igraph'

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/netbiov/plot.netbiov.Rd_%03d_medium.png", width=480, height=480)
> ### Name: plot.netbiov
> ### Title: Visualization of large biological networks.
> ### Aliases: plot.netbiov tkplot.netbiov
> 
> ### ** Examples
> 
>   data("PPI_Athalina")
>   id <- plot.modules(g1)
>   plot.netbiov(id)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>