Last data update: 2014.03.03

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 Results 1 - 10 of 27352 found.
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illuminaMousev1ENSEMBL (Package: illuminaMousev1.db) : Map Ensembl gene accession numbers with Entrez Gene identifiers

illuminaMousev1ENSEMBL is an R object that contains mappings between manufacturer identifiers and Ensembl gene accession numbers.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev1ENSEMBL, illuminaMousev1ENSEMBL2PROBE
● 0 images

illuminaMousev1ENTREZID (Package: illuminaMousev1.db) : Map between Manufacturer Identifiers and Entrez Gene

illuminaMousev1ENTREZID is an R object that provides mappings between manufacturer identifiers and Entrez Gene identifiers.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev1ENTREZID, illuminaMousev1LOCUSID
● 0 images

illuminaMousev1ENZYME (Package: illuminaMousev1.db) : Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers

illuminaMousev1ENZYME is an R object that provides mappings between manufacturer identifiers and EC numbers. illuminaMousev1ENZYME2PROBE is an R object that maps Enzyme Commission (EC) numbers to manufacturer identifiers.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev1ENZYME, illuminaMousev1ENZYME2PROBE
● 0 images

illuminaMousev1GENENAME (Package: illuminaMousev1.db) : Map between Manufacturer IDs and Genes

illuminaMousev1GENENAME is an R object that maps manufacturer identifiers to the corresponding gene name.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev1GENENAME
● 0 images

illuminaMousev1GO (Package: illuminaMousev1.db) : Maps between manufacturer IDs and Gene Ontology (GO) IDs

illuminaMousev1GO is an R object that provides mappings between manufacturer identifiers and the GO identifiers that they are directly associated with. This mapping and its reverse mapping (illuminaMousev1GO2PROBE) do NOT associate the child terms from the GO ontology with the gene. Only the directly evidenced terms are represented here.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev1GO, illuminaMousev1GO2ALLPROBES, illuminaMousev1GO2PROBE
● 0 images

illuminaMousev1MAPCOUNTS (Package: illuminaMousev1.db) : Number of mapped keys for the maps in package illuminaMousev1.db

illuminaMousev1MAPCOUNTS provides the "map count" (i.e. the count of mapped keys) for each map in package illuminaMousev1.db.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev1MAPCOUNTS
● 0 images

illuminaMousev1MGI (Package: illuminaMousev1.db) : Map MGI gene accession numbers with manufacturer identifiers

illuminaMousev1MGI is an R object that contains mappings between manufacturer identifiers and Jackson Laboratory MGI gene accession numbers.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev1MGI, illuminaMousev1MGI2PROBE
● 0 images

illuminaMousev1listNewMappings (Package: illuminaMousev1.db) : Custom mappings added to the package

We have used an extensive re-annotation of the illuminaMousev1 probe sequences to provide additional information that is not captured in the standard Bioconductor packages. Whereas Bioconductor annotations are based on the RefSeq ID that each probe maps to, our additional mappings provide data specific to each probe on the platform. See below for details. We recommend using the probe quality as a form of filtering, and retaining only perfect or good probes for an analysis.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev1ARRAYADDRESS, illuminaMousev1CODINGZONE, illuminaMousev1ENSEMBLREANNOTATED, illuminaMousev1ENTREZREANNOTATED, illuminaMousev1GENOMICLOCATION, illuminaMousev1GENOMICMATCHSIMILARITY, illuminaMousev1NUID, illuminaMousev1OTHERGENOMICMATCHES, illuminaMousev1OVERLAPPINGSNP, illuminaMousev1PROBEQUALITY, illuminaMousev1PROBESEQUENCE, illuminaMousev1REPEATMASK, illuminaMousev1REPORTERGROUPID, illuminaMousev1REPORTERGROUPNAME, illuminaMousev1SECONDMATCHES, illuminaMousev1SECONDMATCHSIMILARITY, illuminaMousev1SYMBOLREANNOTATED, illuminaMousev1TRANSCRIPTOMICMATCHSIMILARITY, illuminaMousev1fullReannotation, illuminaMousev1listNewMappings
● 0 images

illuminaMousev1ORGANISM (Package: illuminaMousev1.db) : The Organism information for illuminaMousev1

illuminaMousev1ORGANISM is an R object that contains a single item: a character string that names the organism for which illuminaMousev1 was built. illuminaMousev1ORGPKG is an R object that contains a chararcter vector with the name of the organism package that a chip package depends on for its gene-centric annotation.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev1ORGANISM, illuminaMousev1ORGPKG
● 0 images

illuminaMousev1PATH (Package: illuminaMousev1.db) : Mappings between probe identifiers and KEGG pathway identifiers

KEGG (Kyoto Encyclopedia of Genes and Genomes) maintains pathway data for various organisms.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev1PATH, illuminaMousev1PATH2PROBE
● 0 images

Created & Maintained by Osamu Ogasawara (osamu.ogasawara@gmail.com) and IMSBIO