Last data update: 2014.03.03

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Results 1 - 10 of 12 found.
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mat5Mrand (Package: ape) : Five Independent Trees

Five independent additive trees.
● Data Source: CranContrib
● Keywords: datasets
● Alias: mat5Mrand
● 0 images

bird.orders (Package: ape) : Phylogeny of the Orders of Birds From Sibley and Ahlquist

This data set describes the phylogenetic relationships of the orders of birds as reported by Sibley and Ahlquist (1990). Sibley and Ahlquist inferred this phylogeny from an extensive number of DNA/DNA hybridization experiments. The “tapestry” reported by these two authors (more than 1000 species out of the ca. 9000 extant bird species) generated a lot of debates.
● Data Source: CranContrib
● Keywords: datasets
● Alias: bird.orders
● 0 images

landplants (Package: ape) : Gene Tree of 36 Landplant rbcL Sequences

This data set describes a gene tree estimated from 36 landplant rbcL sequences.
● Data Source: CranContrib
● Keywords: datasets
● Alias: landplants, landplants.newick
● 0 images

hivtree (Package: ape) : Phylogenetic Tree of 193 HIV-1 Sequences

This data set describes an estimated clock-like phylogeny of 193 HIV-1 group M sequences sampled in the Democratic Republic of Congo.
● Data Source: CranContrib
● Keywords: datasets
● Alias: hivtree, hivtree.newick, hivtree.table
● 0 images

mat3 (Package: ape) : Three Matrices

Three matrices respectively representing Serological (asymmetric), DNA hybridization (asymmetric) and Anatomical (symmetric) distances among 9 families.
● Data Source: CranContrib
● Keywords: datasets
● Alias: mat3
● 0 images

bird.families (Package: ape) : Phylogeny of the Families of Birds From Sibley and Ahlquist

This data set describes the phylogenetic relationships of the families of birds as reported by Sibley and Ahlquist (1990). Sibley and Ahlquist inferred this phylogeny from an extensive number of DNA/DNA hybridization experiments. The “tapestry” reported by these two authors (more than 1000 species out of the ca. 9000 extant bird species) generated a lot of debates.
● Data Source: CranContrib
● Keywords: datasets
● Alias: bird.families
● 0 images

mat5M3ID (Package: ape) : Five Trees

Three partly similar trees, two independent trees.
● Data Source: CranContrib
● Keywords: datasets
● Alias: mat5M3ID
● 0 images

opsin (Package: ape) : Gene Tree of 32 opsin Sequences

This data set describes a gene tree estimated from 32 opsin sequences.
● Data Source: CranContrib
● Keywords: datasets
● Alias: opsin, opsin.newick
● 0 images

carnivora (Package: ape) : Carnivora body sizes and life history traits

Dataset adapted from Gittleman (1986), including 2 morphological variables (body and brain sizes), 8 life history traits variables and 4 taxonomic variables.
● Data Source: CranContrib
● Keywords: datasets
● Alias: carnivora
● 0 images

chiroptera (Package: ape) : Bat Phylogeny

This phylogeny of bats (Mammalia: Chiroptera) is a supertree (i.e. a composite phylogeny constructed from several sources; see source for details).
● Data Source: CranContrib
● Keywords: datasets
● Alias: chiroptera
● 0 images