mat5Mrand
(Package: ape) :
Five Independent Trees
Five independent additive trees.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: mat5Mrand
●
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bird.orders
(Package: ape) :
Phylogeny of the Orders of Birds From Sibley and Ahlquist
This data set describes the phylogenetic relationships of the orders of birds as reported by Sibley and Ahlquist (1990). Sibley and Ahlquist inferred this phylogeny from an extensive number of DNA/DNA hybridization experiments. The “tapestry” reported by these two authors (more than 1000 species out of the ca. 9000 extant bird species) generated a lot of debates.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: bird.orders
●
0 images
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landplants
(Package: ape) :
Gene Tree of 36 Landplant rbcL Sequences
This data set describes a gene tree estimated from 36 landplant rbcL sequences.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: landplants, landplants.newick
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hivtree
(Package: ape) :
Phylogenetic Tree of 193 HIV-1 Sequences
This data set describes an estimated clock-like phylogeny of 193 HIV-1 group M sequences sampled in the Democratic Republic of Congo.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: hivtree, hivtree.newick, hivtree.table
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0 images
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mat3
(Package: ape) :
Three Matrices
Three matrices respectively representing Serological (asymmetric), DNA hybridization (asymmetric) and Anatomical (symmetric) distances among 9 families.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: mat3
●
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bird.families
(Package: ape) :
Phylogeny of the Families of Birds From Sibley and Ahlquist
This data set describes the phylogenetic relationships of the families of birds as reported by Sibley and Ahlquist (1990). Sibley and Ahlquist inferred this phylogeny from an extensive number of DNA/DNA hybridization experiments. The “tapestry” reported by these two authors (more than 1000 species out of the ca. 9000 extant bird species) generated a lot of debates.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: bird.families
●
0 images
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mat5M3ID
(Package: ape) :
Five Trees
Three partly similar trees, two independent trees.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: mat5M3ID
●
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opsin
(Package: ape) :
Gene Tree of 32 opsin Sequences
This data set describes a gene tree estimated from 32 opsin sequences.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: opsin, opsin.newick
●
0 images
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carnivora
(Package: ape) :
Carnivora body sizes and life history traits
Dataset adapted from Gittleman (1986), including 2 morphological variables (body and brain sizes), 8 life history traits variables and 4 taxonomic variables.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: carnivora
●
0 images
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chiroptera
(Package: ape) :
Bat Phylogeny
This phylogeny of bats (Mammalia: Chiroptera) is a supertree (i.e. a composite phylogeny constructed from several sources; see source for details).
● Data Source:
CranContrib
● Keywords: datasets
● Alias: chiroptera
●
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