Last data update: 2014.03.03

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CranContrib
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Results 1 - 8 of 8 found.
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c6snp (Package: ind1KG) :

SNP metadata used in calling for 1000 genomes pilot data – restricted to chr6
● Data Source: BioConductor
● Keywords: datasets
● Alias: c6snp
● 0 images

gw6c6.snp240 (Package: ind1KG) :

data frame with snp annotation regarding chr6, pertinent to the affy genomewide6 SNP chip
● Data Source: BioConductor
● Keywords: datasets
● Alias: gw6c6.snp240
● 0 images

n240 (Package: ind1KG) :

NA19240 – 3 million reads from chromosome 6 derived from 1000 genomes bam file
● Data Source: BioConductor
● Keywords: datasets
● Alias: n240
● 0 images

oregdf (Package: ind1KG) :

data frame representing some of the OREGanno track of UCSC browser
● Data Source: BioConductor
● Keywords: datasets
● Alias: oregdf
● 0 images

pup240_500k (Package: ind1KG) :

data frame on a pileup for 500000 variants noted in NA19240
● Data Source: BioConductor
● Keywords: datasets
● Alias: pup240_500k
● 0 images

pup240_disc (Package: ind1KG) :

parsed samtools pileup result excerpt – only locations where the called base differs from the reference
● Data Source: BioConductor
● Keywords: datasets
● Alias: pup240_disc
● 0 images

rsgdf (Package: ind1KG) :

slice of information on transcripts, for ind1KG vignette
● Data Source: BioConductor
● Keywords: datasets
● Alias: rsgdf
● 0 images

yri240_6 (Package: ind1KG) :

snp.matrix representation of called SNP on chr6 for NA19240
● Data Source: BioConductor
● Keywords: datasets
● Alias: yri240_6
● 0 images