indacPMID
(Package: indac.db) :
Maps between Manufacturer Identifiers and PubMed Identifiers
indacPMID is an R object that provides mappings between manufacturer identifiers and PubMed identifiers. indacPMID2PROBE is an R object that provides mappings between PubMed identifiers and manufacturer identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: indacPMID, indacPMID2PROBE
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indacREFSEQ
(Package: indac.db) :
Map between Manufacturer Identifiers and RefSeq Identifiers
indacREFSEQ is an R object that provides mappings between manufacturer identifiers and RefSeq identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: indacREFSEQ
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indacSYMBOL
(Package: indac.db) :
Map between Manufacturer Identifiers and Gene Symbols
indacSYMBOL is an R object that provides mappings between manufacturer identifiers and gene abbreviations.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: indacSYMBOL
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indacUNIGENE
(Package: indac.db) :
Map between Manufacturer Identifiers and UniGene cluster identifiers
indacUNIGENE is an R object that provides mappings between manufacturer identifiers and UniGene identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: indacUNIGENE
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indacUNIPROT
(Package: indac.db) :
Map Uniprot accession numbers with Entrez Gene identifiers
indacUNIPROT is an R object that contains mappings between the manufacturer identifiers and Uniprot accession numbers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: indacUNIPROT, indacUNIPROT2PROBE
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indac_dbconn
(Package: indac.db) :
Collect information about the package annotation DB
Some convenience functions for getting a connection object to (or collecting information about) the package annotation DB.
● Data Source:
BioConductor
● Keywords: datasets, utilities
● Alias: indac_dbInfo, indac_dbconn, indac_dbfile, indac_dbschema
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expr
(Package: interactiveDisplay) :
An Example ExpressionSet object
The expression data are real but anonymized. The data are from an experiment that used Affymetrix U95v2 chips. The data were processed by dChip and then exported to R for analysis. The data illustrate ExpressionSet-class, with assayData containing the required matrix element exprs and an additional matrix se.exprs. se.exprs has the same dimensions as exprs. The phenoData and standard error estimates (se.exprs) are made up. The information in the "description" slot is fake.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: expr
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A toy GRanges object for demonstration purposes.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: mmgr
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A toy GRangesList dataset derived from the GRanges dataset in this package for purposes of demonstration.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: mmgrl
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se
(Package: interactiveDisplay) :
An Example RangedSummarizedExperiment Object
A toy RangedSummarizedExperiment object for demonstration purposes.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: se
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