Last data update: 2014.03.03

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 Results 51 - 60 of 27352 found.
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illuminaMousev2MGI (Package: illuminaMousev2.db) : Map MGI gene accession numbers with manufacturer identifiers

illuminaMousev2MGI is an R object that contains mappings between manufacturer identifiers and Jackson Laboratory MGI gene accession numbers.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev2MGI, illuminaMousev2MGI2PROBE
● 0 images

illuminaMousev2listNewMappings (Package: illuminaMousev2.db) : Custom mappings added to the package

We have used an extensive re-annotation of the illuminaMousev2 probe sequences to provide additional information that is not captured in the standard Bioconductor packages. Whereas Bioconductor annotations are based on the RefSeq ID that each probe maps to, our additional mappings provide data specific to each probe on the platform. See below for details. We recommend using the probe quality as a form of filtering, and retaining only perfect or good probes for an analysis.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev2ARRAYADDRESS, illuminaMousev2CODINGZONE, illuminaMousev2ENSEMBLREANNOTATED, illuminaMousev2ENTREZREANNOTATED, illuminaMousev2GENOMICLOCATION, illuminaMousev2GENOMICMATCHSIMILARITY, illuminaMousev2NUID, illuminaMousev2OTHERGENOMICMATCHES, illuminaMousev2OVERLAPPINGSNP, illuminaMousev2PROBEQUALITY, illuminaMousev2PROBESEQUENCE, illuminaMousev2REPEATMASK, illuminaMousev2REPORTERGROUPID, illuminaMousev2REPORTERGROUPNAME, illuminaMousev2SECONDMATCHES, illuminaMousev2SECONDMATCHSIMILARITY, illuminaMousev2SYMBOLREANNOTATED, illuminaMousev2TRANSCRIPTOMICMATCHSIMILARITY, illuminaMousev2fullReannotation, illuminaMousev2listNewMappings
● 0 images

illuminaMousev2ORGANISM (Package: illuminaMousev2.db) : The Organism information for illuminaMousev2

illuminaMousev2ORGANISM is an R object that contains a single item: a character string that names the organism for which illuminaMousev2 was built. illuminaMousev2ORGPKG is an R object that contains a chararcter vector with the name of the organism package that a chip package depends on for its gene-centric annotation.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev2ORGANISM, illuminaMousev2ORGPKG
● 0 images

illuminaMousev2PATH (Package: illuminaMousev2.db) : Mappings between probe identifiers and KEGG pathway identifiers

KEGG (Kyoto Encyclopedia of Genes and Genomes) maintains pathway data for various organisms.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev2PATH, illuminaMousev2PATH2PROBE
● 0 images

illuminaMousev2PMID (Package: illuminaMousev2.db) : Maps between Manufacturer Identifiers and PubMed Identifiers

illuminaMousev2PMID is an R object that provides mappings between manufacturer identifiers and PubMed identifiers. illuminaMousev2PMID2PROBE is an R object that provides mappings between PubMed identifiers and manufacturer identifiers.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev2PMID, illuminaMousev2PMID2PROBE
● 0 images

illuminaMousev2REFSEQ (Package: illuminaMousev2.db) : Map between Manufacturer Identifiers and RefSeq Identifiers

illuminaMousev2REFSEQ is an R object that provides mappings between manufacturer identifiers and RefSeq identifiers.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev2REFSEQ
● 0 images

illuminaMousev2SYMBOL (Package: illuminaMousev2.db) : Map between Manufacturer Identifiers and Gene Symbols

illuminaMousev2SYMBOL is an R object that provides mappings between manufacturer identifiers and gene abbreviations.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev2SYMBOL
● 0 images

illuminaMousev2UNIGENE (Package: illuminaMousev2.db) : Map between Manufacturer Identifiers and UniGene cluster identifiers

illuminaMousev2UNIGENE is an R object that provides mappings between manufacturer identifiers and UniGene identifiers.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev2UNIGENE
● 0 images

illuminaMousev2UNIPROT (Package: illuminaMousev2.db) : Map Uniprot accession numbers with Entrez Gene identifiers

illuminaMousev2UNIPROT is an R object that contains mappings between the manufacturer identifiers and Uniprot accession numbers.
● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaMousev2UNIPROT, illuminaMousev2UNIPROT2PROBE
● 0 images

illuminaMousev2_dbconn (Package: illuminaMousev2.db) : Collect information about the package annotation DB

Some convenience functions for getting a connection object to (or collecting information about) the package annotation DB.
● Data Source: BioConductor
● Keywords: datasets, utilities
● Alias: illuminaMousev2_dbInfo, illuminaMousev2_dbconn, illuminaMousev2_dbfile, illuminaMousev2_dbschema
● 0 images

Created & Maintained by Osamu Ogasawara (osamu.ogasawara@gmail.com) and IMSBIO