Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
BioConductor
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Results 1 - 10 of 79 found.
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makeClusterFunctionsLSF (Package: BatchJobs) : Create cluster functions for LSF systems.

Job files are created based on the brew template template.file. This file is processed with brew and then submitted to the queue using the bsub command. Jobs are killed using the bkill command and the list of running jobs is retrieved using bjobs -u $USER -w. The user must have the appropriate privileges to submit, delete and list jobs on the cluster (this is usually the case).
● Data Source: CranContrib
● Keywords:
● Alias: makeClusterFunctionsLSF
● 0 images

loadResults (Package: BatchJobs) : Loads result files for id vector.

Loads result files for id vector.
● Data Source: CranContrib
● Keywords:
● Alias: loadResults
● 0 images

addRegistrySourceDirs (Package: BatchJobs) : Add source dirs to registry.

Mutator function for src.dirs in makeRegistry.
● Data Source: CranContrib
● Keywords:
● Alias: addRegistrySourceDirs
● 0 images

updateRegistry (Package: BatchJobs) : ONLY FOR INTERNAL USAGE.

ONLY FOR INTERNAL USAGE.
● Data Source: CranContrib
● Keywords: internal
● Alias: updateRegistry
● 0 images

dbCreateJobDefTable (Package: BatchJobs) : ONLY FOR INTERNAL USAGE.

ONLY FOR INTERNAL USAGE.
● Data Source: CranContrib
● Keywords: internal
● Alias: dbCreateJobDefTable
● 0 images

getJobs (Package: BatchJobs) : Get jobs from registry by id.

Get jobs from registry by id.
● Data Source: CranContrib
● Keywords:
● Alias: getJobs
● 0 images

setJobNames (Package: BatchJobs) : Set job names.

Set job names.
● Data Source: CranContrib
● Keywords:
● Alias: setJobNames
● 0 images

applyJobFunction (Package: BatchJobs) : applyJobFunction

applyJobFunction ONLY FOR INTERNAL USAGE.
● Data Source: CranContrib
● Keywords: internal
● Alias: applyJobFunction
● 0 images

installPackagesOnSSHWorkers (Package: BatchJobs) : Install packages on SSH workers.

Installation is done via callFunctionOnSSHWorkers and install.packages.
● Data Source: CranContrib
● Keywords:
● Alias: installPackagesOnSSHWorkers
● 0 images

makeClusterFunctionsMulticore (Package: BatchJobs) : Use multiple cores on local Linux machine to spawn parallel jobs.

Jobs are spawned by starting multiple R sessions on the commandline (similar like on true batch systems). Packages parallel or multicore are not used in any way.
● Data Source: CranContrib
● Keywords:
● Alias: makeClusterFunctionsMulticore
● 0 images