R Graphical Manual

Last data update: 2014.03.03

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GSE-class (Package: BioMVCClass) : Class "GSE": A class to represent gene set enrichment data

GSE is a class to represent gene set enrichment data and will be used in the modelData slot in the gseModel object. This class will store all of the information that pertains to performing gene set enrichment.

● Data Source: BioConductor
● Keywords: classes
● Alias: GSE, GSE-class, descr, descr,GSE-method, descr<-, descr<-,GSE-method, expData, expData,GSE-method, expData<-, expData<-,GSE-method, gTestStat, gTestStat,GSE-method, gTestStat<-, gTestStat<-,GSE-method, gsTestStat, gsTestStat,GSE-method, gsTestStat<-, gsTestStat<-,GSE-method, incidMat, incidMat,GSE-method, incidMat<-, incidMat<-,GSE-method
● 0 images

exprModel-class (Package: BioMVCClass) : Class "exprModel": A class to represent an ExpressionSet model

exprModel is a class to represent an ExpresssionSet model. This class inherits from the virtual class, gModel. An object of exprModel is responsible for storing and updating the data.

● Data Source: BioConductor
● Keywords: classes
● Alias: exprModel, exprModel-class
● 0 images

graphModel-class (Package: BioMVCClass) : Class "graphModel": A class to represent a graph model

graphModel is a class to represent a graph model. This class inherits from the virtual class, gModel. An object of graphModel is responsible for storing and updating the data.

● Data Source: BioConductor
● Keywords: classes
● Alias: graphModel, graphModel-class
● 0 images

graphView-class (Package: BioMVCClass) : Class "graphView": A class to represent a graph view

graphView is a class to represent a view that is a graph. graphView inherits from the class, plotView, which inherits from the virtual class, genView.

● Data Source: BioConductor
● Keywords: classes
● Alias: grLayout, grLayout,graphView-method, grLayout<-, grLayout<-,graphView-method, graphView, graphView-class
● 0 images

gseModel-class (Package: BioMVCClass) : Class "gseModel": A class to represent a GSE model

gseModel is a class to represent a gene set enrichment (GSE) model. This class inherits from the virtual class, gModel.

● Data Source: BioConductor
● Keywords: classes
● Alias: gseModel, gseModel-class
● 0 images

heatmapView-class (Package: BioMVCClass) : Class "heatmapView": A class to represent a heatmap view

heatmapView is a class to represent a view that is a heatmap. heatmapView inherits from the class, plotView, which inherits from the virtual class, genView.

● Data Source: BioConductor
● Keywords: classes
● Alias: heatmapView, heatmapView-class, ordering, ordering,heatmapView-method, ordering<-, ordering<-,heatmapView-method, rNames, rNames,heatmapView-method, rNames<-, rNames<-,heatmapView-method
● 0 images