|
A helper to re-estimate the spot location or find the capture site location (BF image modelling).
● Data Source:
BioConductor
● Keywords: internal
● Alias: getCsFAIL
●
0 images
|
|
It retrieves the run effect and background corrected signals.
● Data Source:
BioConductor
● Keywords:
● Alias: getFluo
●
0 images
|
|
It produces the background corrected data when run correction is not needed. It can be used for data coming from a single run instead of Fluo_adjustment(). Alternatively, this function can be used to visualize the fluorescence densities of a single batch before deciding the form of the normalization model.
● Data Source:
BioConductor
● Keywords:
● Alias: getFluo_byRun
●
0 images
|
|
Identifies one or multiple spot(s) in the image data matrix.
● Data Source:
BioConductor
● Keywords: internal
● Alias: getSpot
●
0 images
|
|
It generates a coded message of the estimation type that is being performed.
● Data Source:
BioConductor
● Keywords: internal
● Alias: giveWarning
●
0 images
|
|
It reconstructs the BF image characteristic lines.
● Data Source:
BioConductor
● Keywords: internal
● Alias: grouplines
●
0 images
|
|
It performs the grubbs test for outliers.
● Data Source:
BioConductor
● Keywords: internal
● Alias: grubbs
●
0 images
|
|
A helper to identify the vertical BF image characteristic lines.
● Data Source:
BioConductor
● Keywords: internal
● Alias: highlight.cols
●
0 images
|
|
It back-transforms the transformed adjusted cell fluorescence signals of a matrix.
● Data Source:
BioConductor
● Keywords: internal
● Alias: invTransform
●
0 images
|
|
The original function to perform isotone regression (Motakis et al 2006).
● Data Source:
BioConductor
● Keywords: internal
● Alias: isotone
●
0 images
|
providing 
.