HWIlr computes isometric log ratio coordinates for genotypic compositions (AA, AB, BB)
● Data Source:
CranContrib
● Keywords: misc
● Alias: HWIlr
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MakeCounts
(Package: HardyWeinberg) :
Create genotype counts from bi-allelic marker data
MakeCounts creates a matrix of genotype counts, with one row for each bi-allelic marker, containing 4 columns with the counts AA, AB, BB and NA (missings) respectively
● Data Source:
CranContrib
● Keywords: misc
● Alias: MakeCounts
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HWClr computes the centred log-ratio transformation for genotype counts of bi-allelic genetic markers.
● Data Source:
CranContrib
● Keywords: misc
● Alias: HWClr
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HWChisq
(Package: HardyWeinberg) :
Chi square tests for Hardy Weinberg equilibrium
HWChisq performs the chi-square test for Hardy-Weinberg equilibrium both for autosomal and X-chromosomal markers.
● Data Source:
CranContrib
● Keywords: htest
● Alias: HWChisq
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ifisherz
(Package: HardyWeinberg) :
Inverse Fisher z transformation
Calculates the inverse of Fisher's z transformation
● Data Source:
CranContrib
● Keywords: misc
● Alias: ifisherz
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af
(Package: HardyWeinberg) :
Function to compute allele frequencies
Function af computes the allele frequencies for a matrix or a vector containing genotypic compositions.
● Data Source:
CranContrib
● Keywords: misc
● Alias: af
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HWChisqMat executes the Chisquare test for HWE for each row in a matrix.
● Data Source:
CranContrib
● Keywords: htest
● Alias: HWChisqMat
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HWExactMat executes a fast Exact test for HWE for each row in a matrix.
● Data Source:
CranContrib
● Keywords: htest
● Alias: HWExactMat
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Function HWD computes Weir's disequilibrium coefficient D.
● Data Source:
CranContrib
● Keywords: misc
● Alias: HWD
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HWExactPrevious performs an exact test for Hardy-Weinberg equilibrium
● Data Source:
CranContrib
● Keywords: htest
● Alias: HWExactPrevious
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providing 
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