ICBayes-package
(Package: ICBayes) :
Bayesian Semiparametric Models for Interval-Censored Data
This package contains functions to fit several survival regression models (including the proportional hazard model, the proportional odds model, and the probit model) for interval-censored data under Bayesian framework. Estimations are available for both regression coefficients and survival functions.The Bayesian model selection criterion log pseudo marginal likelihood (LPML) is computed.
● Data Source:
CranContrib
● Keywords:
● Alias: ICBayes-package
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SurvtoLR
(Package: ICBayes) :
Transform Surv object to data matrix with L and R columns
Take a Surv object and transforms it into a data matrix with two columns, L and R, representing the left and right points of observed time intervals. For right-censored data, R = NA.
● Data Source:
CranContrib
● Keywords:
● Alias: SurvtoLR
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case1ph
(Package: ICBayes) :
PH model for case 1 interval-censored data
Fit proportional hazards model for case 1 interval-censored data. Use MCMC method to estimate regression coefficients, baseline survival, and survival at user-specified covariate values.
● Data Source:
CranContrib
● Keywords:
● Alias: case1ph
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case1po
(Package: ICBayes) :
PO model for case 1 interval-censored data
Fit proportional odds model for case 1 interval-censored data. Use MCMC method to estiamte regression coefficients, baseline survival, and survival function at user-specified covariate values.
● Data Source:
CranContrib
● Keywords:
● Alias: case1po
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case2probit
(Package: ICBayes) :
Probit model for general interval-censored data
Fit probit model to general interval-censored data. Use MCMC method to estimate regression coefficients, baseline survival, and survival function at user-specified covariate values.
● Data Source:
CranContrib
● Keywords:
● Alias: case2probit
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case2ph
(Package: ICBayes) :
PH model for general interval-censored data
Fit proportional hazards model for general interval-censored data. Use MCMC method to estimate regression coefficients, baseline survival, and survival function at user-specified covariate values.
● Data Source:
CranContrib
● Keywords:
● Alias: case2ph
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plot.ICBayes
(Package: ICBayes) :
Plot baseline survival function
Plot estimated baseline survival function at grids , which are stored in the ICBayes object.
● Data Source:
CranContrib
● Keywords:
● Alias: plot.ICBayes
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ICBayes
(Package: ICBayes) :
PH, PO, and Probit Models for Interval-Censored Data
Calls the case1ph , case2ph , or case2probit function to fit the corresponding model. Give point estimates and credible intervals for regression coefficients and estimation and plot of survival functions.
● Data Source:
CranContrib
● Keywords: case 1 interval-censored data, case 2 interval-censored data
● Alias: ICBayes, ICBayes.default, ICBayes.formula
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print.ICBayes
(Package: ICBayes) :
print method for ICBayes object
Print output from function ICBayes
● Data Source:
CranContrib
● Keywords:
● Alias: print.ICBayes
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