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Before testing a specific region using a generalized score type test, this function does the preliminary data management, such as pareparing spline basis functions for E etc..
● Data Source:
CranContrib
● Keywords: preliminary work
● Alias: GEI.prelim
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Test the interaction between an environmental exposure and one region/gene on a quantitative outcome using SSD format files.
● Data Source:
CranContrib
● Keywords: plink_test_single
● Alias: GEI.SSD.OneSet_SetIndex
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Test the interaction between an environmental exposure and multiple region/genes on a quantitative outcome using SSD format files.
● Data Source:
CranContrib
● Keywords: plink_test_all
● Alias: GEI.SSD.All
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Test the genetic association between an quantitative outcome and one region/gene using SSD format files.
● Data Source:
CranContrib
● Keywords: plink_test_single
● Alias: GA.SSD.OneSet_SetIndex
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Once the preliminary work is done using "GEI.prelim()", this function tests a specifc region/gene. Single SNP analyses are also incorporated.
● Data Source:
CranContrib
● Keywords: test
● Alias: GEI.test
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Before testing a specific region using a generalized score type test, this function does the preliminary data management, such as fitting the model under the null hypothesis.
● Data Source:
CranContrib
● Keywords: preliminary work
● Alias: GA.prelim
●
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Once the preliminary work is done using "GA.prelim()", this function tests a specifc region/gene. Single SNP analyses are also incorporated.
● Data Source:
CranContrib
● Keywords: test
● Alias: GA.test
●
0 images
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Test the association between an quantitative outcome and multiple region/genes using SSD format files.
● Data Source:
CranContrib
● Keywords: plink_test_all
● Alias: GA.SSD.All
●
0 images
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providing 
.