R Graphical Manual

Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
BioConductor
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Results 1 - 6 of 6 found.
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IBS_pseudo (Package: LGRF) :

If users want to calculate the IBS similarity, this function creates the IBS pseudo variables. This is in order to calculate the IBS similarity in an efficient way.

● Data Source: CranContrib
● Keywords: IBS
● Alias: IBS_pseudo
● 0 images

LGRF.SSD.All (Package: LGRF) :

Test the association between an outcome variable and multiple regions/genes using SSD format files.

● Data Source: CranContrib
● Keywords: plink_test_all
● Alias: LGRF.SSD.All
● 0 images

null.LGRF (Package: LGRF) :

Before testing a specific region using a score test, this function fits the longitudinal genetic random field model under the null hypothesis.

● Data Source: CranContrib
● Keywords: null model
● Alias: null.LGRF
● 0 images

test.MinP (Package: LGRF) :

If users want to compare LGRF with the minimum p-value (MinP) test, this function tests a specifc region/gene by a GEE based minimum p-value test after fitting "null.LGRF()".

● Data Source: CranContrib
● Keywords: test
● Alias: test.MinP
● 0 images

LGRF.SSD.OneSet_SetIndex (Package: LGRF) :

Test the association between an outcome variable and one region/gene using SSD format files.

● Data Source: CranContrib
● Keywords: plink_test_single
● Alias: LGRF.SSD.OneSet_SetIndex
● 0 images

test.LGRF (Package: LGRF) :

Once the model under the null model is fitted using "null.LGRF()", this function tests a specifc region/gene.

● Data Source: CranContrib
● Keywords: test
● Alias: test.LGRF
● 0 images