MigClim.testData
(Package: MigClim) :
Test data for the MigClim dispersal simulation tool
Data frame that contains data for simulating the dispersal of a species under environmental change conditions. The data frame contains information on the species' initial distribution in the landscape, how the suitability of its habitat evolves over time, and some information on which areas in the landscape represent barriers to dispersal for the species. Each row of the data frame contains the information for a given 50 x 50m pixel in the landscape
● Data Source:
CranContrib
● Keywords:
● Alias: MigClim.testData
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MigClim.migrate
(Package: MigClim) :
Initialize and run the MigClim simulation
Initialize the main MigClim simulation by passing the relevant parameter values, which will be written to a parameter file. The simulation is then run with these parameter values.
● Data Source:
CranContrib
● Keywords:
● Alias: MigClim.migrate
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MigClim.userGuide
(Package: MigClim) :
Displays the MigClim user guide in PDF format
Displays the MigClim user guide in PDF format. The function takes no argument.
● Data Source:
CranContrib
● Keywords:
● Alias: MigClim.userGuide
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MigClim.validate
(Package: MigClim) :
Validation of genetic clusters migration simulation results.
Compare the output of a genetic clusters migration simulation to an observed genetic clusters distribution.
● Data Source:
CranContrib
● Keywords:
● Alias: MigClim.validate
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MigClim.plot
(Package: MigClim) :
Plots ascii raster ouputs of the MigClim.migrate function
Plots ascii raster ouputs of the MigClim.migrate function with an adequate color scale and saves the result as a JPEG or PNG file (or does simply display it in the R console).
● Data Source:
CranContrib
● Keywords:
● Alias: MigClim.plot
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MigClim.genClust
(Package: MigClim) :
Run a simulation of migration of genetic clusters.
Simulate the migration of genetic clusters. Centers of origin of the genetic clusters are picked randomly or defined by the user as the initial distribution. The simulation makes the genetic clusters migrate until the last time step for which data files are provided. Unlike the 'migrate' function in this package, this genetic clusters migration simulation assumes large time scales (e.g., 1000 years per step).
● Data Source:
CranContrib
● Keywords:
● Alias: MigClim.genClust
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