R Graphical Manual

Last data update: 2014.03.03

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Results 1 - 10 of 130 found.
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rss (Package: NMF) : Residual Sum of Squares and Explained Variance

rss and evar are S4 generic functions that respectively computes the Residual Sum of Squares (RSS) and explained variance achieved by a model.

● Data Source: CranContrib
● Keywords: methods
● Alias: evar, evar,ANY-method, evar-methods, rss, rss,ANY-method, rss,matrix-method, rss-methods
● 0 images

show,NMFOffset-method (Package: NMF) : Show method for objects of class code{NMFOffset

Show method for objects of class NMFOffset

● Data Source: CranContrib
● Keywords: methods
● Alias: show,NMFOffset-method
● 0 images

connectivity (Package: NMF) : Clustering Connectivity and Consensus Matrices

connectivity is an S4 generic that computes the connectivity matrix based on the clustering of samples obtained from a model's predict method.

● Data Source: CranContrib
● Keywords: methods
● Alias: connectivity, connectivity,ANY-method, connectivity,NMF-method, connectivity,factor-method, connectivity,numeric-method, connectivity-methods, consensus, consensus,NMF-method, consensus,NMFfitX-method, consensus-methods
● 0 images

rmatrix (Package: NMF) : Generating Random Matrices

The S4 generic rmatrix generates a random matrix from a given object. Methods are provided to generate matrices with entries drawn from any given random distribution function, e.g. runif or rnorm.

● Data Source: CranContrib
● Keywords: methods
● Alias: rmatrix, rmatrix,ANY-method, rmatrix,NMF-method, rmatrix,numeric-method, rmatrix-methods
● 0 images

parallel-NMF (Package: NMF) : Utilities for Parallel Computations

Utilities for Parallel Computations

● Data Source: CranContrib
● Keywords:
● Alias: gVariable, hostfile, parallel-NMF, ts_eval, ts_tempfile
● 0 images

plot,NMFfit,missing-method (Package: NMF) : Plots the residual track computed at regular interval during the fit of

Plots the residual track computed at regular interval during the fit of the NMF model x.

● Data Source: CranContrib
● Keywords: methods
● Alias: plot,NMFfit,missing-method
● 0 images

Strategy-class (Package: NMF) : Generic Strategy Class

This class defines a common interface for generic algorithm strategies (e.g., NMFStrategy).

● Data Source: CranContrib
● Keywords: internal, methods
● Alias: Strategy-class, name, name,Strategy-method, name-methods, name<-, name<-,Strategy,character-method, name<--methods
● 0 images

ccPalette (Package: NMF) : Builds a Color Palette from Compact Color Specification

Builds a Color Palette from Compact Color Specification

● Data Source: CranContrib
● Keywords: internal
● Alias: ccPalette
● 0 images

offset,NMFfit-method (Package: NMF) : Returns the offset from the fitted model.

Returns the offset from the fitted model.

● Data Source: CranContrib
● Keywords: methods
● Alias: offset,NMFfit-method
● 0 images

nmf_update.KL.h (Package: NMF) : NMF Multiplicative Updates for Kullback-Leibler Divergence

Multiplicative updates from Lee et al. (2001) for standard Nonnegative Matrix Factorization models V approx W H, where the distance between the target matrix and its NMF estimate is measured by the Kullback-Leibler divergence.

● Data Source: CranContrib
● Keywords:
● Alias: nmf_update.KL, nmf_update.KL.h, nmf_update.KL.h_R, nmf_update.KL.w, nmf_update.KL.w_R
● 0 images