R Graphical Manual

Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
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Data Type

Packages
Functions
Images
Data set

Classification

Results 1 - 10 of 11 found.
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(Package: NSA) :

Find normal regions.

● Data Source: CranContrib
● Keywords: methods
● Alias: fitNSA.matrix
● 0 images

(Package: NSA) : Package NSA

Post-normalization of total copy-number estimates.

● Data Source: CranContrib
● Keywords: package
● Alias: NSA, NSA-package
● 0 images

Non-documented objects (Package: NSA) : Non-documented objects

This page contains aliases for all "non-documented" objects that R CMD check detects in this package.

● Data Source: CranContrib
● Keywords: documentation, internal
● Alias: Non-documented objects
● 0 images

(Package: NSA) :

Package: NSA
Class SampleNormalization

● Data Source: CranContrib
● Keywords: classes
● Alias: SampleNormalization
● 0 images

process.NSANormalization (Package: NSA) : Finds normal regions within tumoral samples

Finds normal regions within tumoral samples.

● Data Source: CranContrib
● Keywords: internal, methods
● Alias: NSANormalization.process, process,NSANormalization-method, process.NSANormalization
● 0 images

(Package: NSA) :

Normalize allele-specific copy numbers (total,fracB), where total is the total (non-polymorphic) signal and fracB is the allele B fraction. It is only loci with a non-missing (NA) fracB value that are considered to be SNPs and normalized by CalMaTe. The other loci are left untouched.

● Data Source: CranContrib
● Keywords: methods
● Alias: snpsNByTotalAndFracB.matrix
● 0 images

(Package: NSA) :

Package: NSA
Class NSANormalization

● Data Source: CranContrib
● Keywords: classes
● Alias: NSANormalization
● 0 images

(Package: NSA) :

Package: NSA
Class SNPsNormalization

● Data Source: CranContrib
● Keywords: classes
● Alias: SNPsNormalization
● 0 images

(Package: NSA) :

Finds normal regions within tumoral samples.

● Data Source: CranContrib
● Keywords: internal, methods
● Alias: SampleNormalization.process, process,SampleNormalization-method, process.SampleNormalization
● 0 images

(Package: NSA) :

Finds normal regions within tumoral samples (total,fracB), where total is the total (non-polymorphic) signal and fracB is the allele B fraction. It is only loci with a non-missing (NA) fracB value that are considered to be SNPs and normalized by CalMaTe. The other loci are left untouched.

● Data Source: CranContrib
● Keywords: methods
● Alias: NSAByTotalAndFracB.matrix
● 0 images