Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
BioConductor
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Results 1 - 5 of 5 found.
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PAS.binmod (Package: PAS) :

This is the main function for bin model analysis.
● Data Source: CranContrib
● Keywords:
● Alias: PAS.binmod, binmod
1 images

binmod.predict (Package: PAS) :

Extract predicted genomic breeding values from the 10-fold cross-validation result that has been saved in a binmod object, or predict the breeding values for a new sample.
● Data Source: CranContrib
● Keywords:
● Alias: PAS.binmod.predict, binmod.predict, predict, predict.binmod
● 0 images

binmod.plot (Package: PAS) :

Generate figures using an object created by the binmod function.
● Data Source: CranContrib
● Keywords:
● Alias: PAS.binmod.plot, binmod.plot, plot, plot.binmod
1 images

PAS-package (Package: PAS) :

The PAS package was developed to implement the method and algorithm developed by Zhiqiu Hu, Shizhong Xu, Zhiquan Wang, and Rongcai Yang for genomic value prediction. Although the current version of the package only provided functions for the bin model analysis (Hu et al., 2012), the package will be developed continuously to incorporate new methods of genomic value prediction that will be introduced by the authors in the near future.

updates:
1. A new option foldid was added into the binmod function to allow users assigning foldid for cross-validations;
2. A new output item obj$optimal$map.binsnp was added bridging the bin map and the snp map in a binmod object.
● Data Source: CranContrib
● Keywords: package
● Alias: PAS
● 0 images

PAS.binmod.print (Package: PAS) :

Show a terse summarize for a binmod object.
● Data Source: CranContrib
● Keywords:
● Alias: PAS.binmod.print, binmod.print, print, print.binmod
● 0 images