ATrack
(Package: Pviz) :
ATrack class
This class contains Gviz's AnnotationTrack and adds default values to the genome and chromosome slot
● Data Source:
BioConductor
● Keywords:
● Alias: ATrack, ATrack-class
●
1 images
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This track can be used to display the result of pepStat analysis for a single clade. It contains DTrack .
● Data Source:
BioConductor
● Keywords:
● Alias: CladeTrack, CladeTrack-class
●
1 images
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DTrack
(Package: Pviz) :
DTrack class
This class contains Gviz's DataTrack and adds default values to the genome and chromosome slot
● Data Source:
BioConductor
● Keywords:
● Alias: DTrack, DTrack-class
●
0 images
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This track can be used to display the frequency of antibody binding for each probe on an arrayas predicted by pepStat 's function makeCalls .
● Data Source:
BioConductor
● Keywords:
● Alias: ProbeTrack, ProbeTrack-class
●
2 images
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A track to display an axis for protein or peptide sequences
● Data Source:
BioConductor
● Keywords:
● Alias: ProteinAxisTrack, ProteinAxisTrack-class
●
1 images
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A track to display peptides and protein sequences.
● Data Source:
BioConductor
● Keywords:
● Alias: ProteinSequenceTrack, ProteinSequenceTrack-class
●
3 images
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plot_clade
(Package: Pviz) :
Plot frequency of response for a single clade.
Plot an axis and the frequency of response of a single selected clade.
● Data Source:
BioConductor
● Keywords:
● Alias: plot_clade
●
1 images
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plot_inter
(Package: Pviz) :
Plot frequency of response for each group
Plot an axis and the frequency of response of each group, averaged by peptides at each position.
● Data Source:
BioConductor
● Keywords:
● Alias: plot_inter
●
1 images
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