labkey.insertRows
(Package: Rlabkey) :
Insert new rows of data into a LabKey Server
Insert new rows of data into the database.
● Data Source:
CranContrib
● Keywords: IO
● Alias: labkey.insertRows
●
0 images
|
getSession
(Package: Rlabkey) :
Creates and returns a LabKey Server session
The session object holds server address and folder context for a user working with LabKey Server. The session-based model supports more efficient interactive use of LabKey Server from R.
● Data Source:
CranContrib
● Keywords: file
● Alias: getSession
●
0 images
|
lsProjects
(Package: Rlabkey) :
List the projects available at a given LabKey Server address
Lists the projects available. Takes a string URL instead of a session, as it is intended for use before creating a session.
● Data Source:
CranContrib
● Keywords: file
● Alias: lsProjects
●
0 images
|
labkey.makeRemotePath
(Package: Rlabkey) :
Build a file path to data on a remote machine
Replaces a local root with a remote root given a full path
● Data Source:
CranContrib
● Keywords: file
● Alias: labkey.makeRemotePath
●
0 images
|
lsSchemas
(Package: Rlabkey) :
List the available schemas
Lists the available schemas given the current folder path for a LabKey session
● Data Source:
CranContrib
● Keywords: file
● Alias: lsSchemas
●
0 images
|
labkey.setCurlOptions
(Package: Rlabkey) :
Modify the current set of Curl options that are being used in the existing session
Rlabkey uses the package RCurl to connect to the LabKey Server.
● Data Source:
CranContrib
● Keywords:
● Alias: labkey.setCurlOptions
●
0 images
|
labkey.getLookupDetails
(Package: Rlabkey) :
Retrieve detailed information on a LabKey query
Fetch a list of output columns and their attributes from the query referenced by a lookup field
● Data Source:
CranContrib
● Keywords: IO
● Alias: labkey.getLookupDetails
●
0 images
|
labkey.updateRows
(Package: Rlabkey) :
Update existing rows of data in a labkey database
Send data from an R session to update existing rows of data in the database.
● Data Source:
CranContrib
● Keywords: IO
● Alias: labkey.updateRows
●
0 images
|
labkey.selectRows
(Package: Rlabkey) :
Retrieve data from a labkey database
Import full datasets or selected rows into R. The data can be sorted and filtered prior to import.
● Data Source:
CranContrib
● Keywords: IO
● Alias: labkey.selectRows
●
0 images
|
This package allows the transfer of data between a LabKey Server and an R session. Data can be retrieved from LabKey into a data frame in R by specifying the query schema information (labkey.selectRows and getRows) or by using sql commands (labkey.executeSql). From an R session, existing data can be updated (labkey.updateRows), new data can be inserted (labkey.insertRows and labkey.importRows) or data can be deleted from the LabKey database (labkey.deleteRows). Interactive R users can discover available data via schema objects (labkey.getSchema).
● Data Source:
CranContrib
● Keywords: package
● Alias: Rlabkey, Rlabkey-package
●
0 images
|
providing 
.