R Graphical Manual

Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
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Results 1 - 10 of 11 found.
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SubpathwayGMir-internal (Package: SubpathwayGMir) : SubpathwayGMir internal functions

These are functions internally called by other functions in package and not meant to be called by the user.

● Data Source: CranContrib
● Keywords: internal
● Alias: fdr.est, getEdgeLabel, getEdgeLty, getLayout, getOneNodePath, getSymbolFromGene, k2ri, mytriangle
● 0 images

getLocSubGraph (Package: SubpathwayGMir) : Get the located metabolic subpathways

Locate metabolic subpathways mediated by miRNAs.

● Data Source: CranContrib
● Keywords: file
● Alias: getLocSubGraph
● 0 images

printGraph (Package: SubpathwayGMir) : Print the results of graph annotation and identification

Print the results of graph annotation and identification.

● Data Source: CranContrib
● Keywords: file
● Alias: printGraph
● 0 images

initializeK2ri (Package: SubpathwayGMir) : Initialize environment variable k2ri

Initialize environment variable k2ri.

● Data Source: CranContrib
● Keywords: file
● Alias: initializeK2ri
● 0 images

getBackground (Package: SubpathwayGMir) :

getBackground attempts to get the background of user-specified molecules.

● Data Source: CranContrib
● Keywords: file
● Alias: getBackground
● 0 images

identifyGraph (Package: SubpathwayGMir) : Annotate and identify subpathways

Annotate user-interested molecules to pathways and identify significantly enriched subpathways.

● Data Source: CranContrib
● Keywords: file
● Alias: identifyGraph
● 0 images

plotGraph (Package: SubpathwayGMir) : Visualize a pathway graph

Visualize a pathway graph.

● Data Source: CranContrib
● Keywords: file
● Alias: plotGraph
● 0 images

SubpathwayGMir-package (Package: SubpathwayGMir) : The SubpathwayGMir package

SubpathwayGMir is an R package for identifying metabolic subpathways mediated by microRNAs (miRNAs).

● Data Source: CranContrib
● Keywords:
● Alias: SubpathwayGMir, SubpathwayGMir-package
● 0 images

GetK2riData (Package: SubpathwayGMir) :

Get variables in current environment.

● Data Source: CranContrib
● Keywords: file
● Alias: GetK2riData
● 0 images

updateOrgEnvir (Package: SubpathwayGMir) :

Update the organism-specific environment variables that user interested.

● Data Source: CranContrib
● Keywords: file
● Alias: updateOrgEnvir
● 0 images