R Graphical Manual

Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
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Data Type

Packages
Functions
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Data set

Classification

Results 1 - 8 of 8 found.
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leukemia (Package: TBEST) :

This data set represents mRNA expression of 500 genes in 38 patient cases of leukemia. These 38 cases fall into 3 subtypes: AML (11), T-lineage ALL (8) and B-lineage ALL (19). The set was obtained by removing 499 genes from Golub's leukemia data, to facilitate the execution of examples for this package.

● Data Source: CranContrib
● Keywords:
● Alias: leukemia
● 0 images

PartitionTree (Package: TBEST) :

Description: The function finds the most detailed partition of a hierartchical tree into tight branches, given a level of significance for tightness.

● Data Source: CranContrib
● Keywords:
● Alias: PartitionTree
● 0 images

best (Package: TBEST) :

Description: This object is a list of three items. It contains a statistical assessment of the tightness of branches in a hierarchical tree.

● Data Source: CranContrib
● Keywords:
● Alias: best
● 0 images

T10 (Package: TBEST) :

This data set summarizes DNA copy number variation in 100 individual cancer cells harvested from a breast tumor. The cells belong to four subtypes, differing by ploidy.There are 47 Diploid+Pseudo-diploid, 24 Hypo-diploid, 4 Aneuploid B and 25 Aneuploid A cells. Their copy number profiles are summarized in terms of 354 amplification and deletion "cores", are computed by the CORE package.

● Data Source: CranContrib
● Keywords:
● Alias: T10
● 0 images

plot.best (Package: TBEST) :

Description: A plot method for the class best.

● Data Source: CranContrib
● Keywords:
● Alias: plot, plot.best
● 0 images

LeafContent (Package: TBEST) :

Description: find the names of all items comprising one or more branches of a hierarchical tree.

● Data Source: CranContrib
● Keywords:
● Alias: LeafContent
● 0 images

partition (Package: TBEST) :

Description: This object is a list of four items, which jointly specify a detailed partition of a hierarchical tree into tight branches.

● Data Source: CranContrib
● Keywords:
● Alias: partition
● 0 images

SigTree (Package: TBEST) :

Description: Given data from which a hierarchical tree is grown, compute measures of tightness for each branch, sample from the null distribution of these measures in the randomized data and compute the corresponding p-values.

● Data Source: CranContrib
● Keywords:
● Alias: SigTree
● 0 images