.aaf.character
(Package: annaffy) :
Generic constructor for classes extending character
Retrieve annotation from a character data source.
● Data Source:
BioConductor
● Keywords: file, internal
● Alias: .aaf.character
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.aaf.goterm
(Package: annaffy) :
Fetch Gene Ontology term information
Given a Gene Ontology number, return its type and name.
● Data Source:
BioConductor
● Keywords: file, internal
● Alias: .aaf.goterm
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aaf.handler
(Package: annaffy) :
Handle feching annotation data columns
Dispatches requests for annotation data to the correct function. Alternatively returns a list of all the columns it supports.
● Data Source:
BioConductor
● Keywords: file
● Alias: aaf.handler
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.aaf.integer
(Package: annaffy) :
Generic constructor for classes extending integer
Retrieve annotation from an integer data source.
● Data Source:
BioConductor
● Keywords: file, internal
● Alias: .aaf.integer
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.aaf.raw
(Package: annaffy) :
Fetch raw annotation data
Retrieve annotation data from a data package, loading the library if necessary.
● Data Source:
BioConductor
● Keywords: file, internal
● Alias: .aaf.raw
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aafChromLoc-class
(Package: annaffy) :
Class aafChromLoc, a class for gene chromosome locations
An abstraction for gene chromosome locations from Bioconductor data packages.
● Data Source:
BioConductor
● Keywords: classes
● Alias: aafChromLoc-class
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aafChromLoc
(Package: annaffy) :
Constructor for aafChromLoc objects
For the given probeids, constructs an aafList of aafChromLoc objects containing annotation data from the chip data package.
● Data Source:
BioConductor
● Keywords: file
● Alias: aafChromLoc
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aafChromosome-class
(Package: annaffy) :
Class aafChromosome, a class for gene chromosome assignments
An abstraction for gene gene chromosome assignments from Bioconductor data packages.
● Data Source:
BioConductor
● Keywords: classes
● Alias: aafChromosome-class
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aafChromosome
(Package: annaffy) :
Constructor for aafChromosome objects
For the given probeids, constructs an aafList of aafChromosome objects containing annotation data from the chip data package.
● Data Source:
BioConductor
● Keywords: file
● Alias: aafChromosome
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aafCytoband-class
(Package: annaffy) :
Class aafCytoband, a class for cytoband data
An abstraction for cytoband data from Bioconductor data packages.
● Data Source:
BioConductor
● Keywords: classes
● Alias: aafCytoband-class, getText,aafCytoband-method, getURL,aafCytoband-method, show,aafCytoband-method
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