Biclust is the class structure for results of a bicluster algorithm. It contains all information needed for further processing. The show Method gives the Name of the Algorithm used and the first Bicluster found. The summary Method gives sizes of all bicluster found.
Draws a microarray data matrix as a heatmap, with rows and colums reordered so the rows and columns of the input bicluster will be at top-left of the matrix.
BCCC
(Package: biclust) :
The CC Bicluster algorithm
Performs CC Biclustering based on the framework by Cheng and Church (2000). Searches for submatrices with a score lower than a specific treshold in a standardized data matrix.
The function biclust is the main function of the package. It calculates the bicluster in a data matrix using the algorithm specified in the method-argument. Currently the package contains 5 different methods for the use in biclust. For each algorithm see the class help files for further details. For some algorithms preproccessing is necessary, e.g. BCBimax only runs with a logical matrix.