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Represents a Mart class, containing connections to different BioMarts
● Data Source:
BioConductor
● Keywords: methods
● Alias: Mart-class, show,Mart-method
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NP2009code
(Package: biomaRt) :
Display the analysis code from the 2009 Nature protocols paper
This function opens an editor displaying the analysis code of the Nature Protocols 2009 paper
● Data Source:
BioConductor
● Keywords: methods
● Alias: NP2009code
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attributePages
(Package: biomaRt) :
Gives a summary of the attribute pages
Attributes in BioMart databases are grouped together in attribute pages. The attributePages function gives a summary of the attribute categories and groups present in the BioMart. These page names can be used to display only a subset of the available attributes in the listAttributes function.
● Data Source:
BioConductor
● Keywords: methods
● Alias: attributePages
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exportFASTA
(Package: biomaRt) :
Exports getSequence results to FASTA format
Exports getSequence results to FASTA format
● Data Source:
BioConductor
● Keywords: methods
● Alias: exportFASTA
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filterOptions
(Package: biomaRt) :
Displays the filter options
Displays a set of predetermed values for the specified filter (if available).
● Data Source:
BioConductor
● Keywords: methods
● Alias: filterOptions
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filterType
(Package: biomaRt) :
Displays the filter type
Displays the type of the filer given a filter name.
● Data Source:
BioConductor
● Keywords: methods
● Alias: filterType
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getBM
(Package: biomaRt) :
Retrieves information from the BioMart database
This function is the main biomaRt query function. Given a set of filters and corresponding values, it retrieves the user specified attributes from the BioMart database one is connected to.
● Data Source:
BioConductor
● Keywords: methods
● Alias: getBM
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getBMlist
(Package: biomaRt) :
Retrieves information from the BioMart database
This function is the main biomaRt query function. Given a set of filters and corresponding values, it retrieves the user specified attributes from the BioMart database one is connected to
● Data Source:
BioConductor
● Keywords: methods
● Alias: getBMlist
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getGene
(Package: biomaRt) :
Retrieves gene annotation information given a vector of identifiers
This function retrieves gene annotations from Ensembl given a vector of identifiers. Annotation includes chromsome name, band, start position, end position, gene description and gene symbol. A wide variety of identifiers is available in Ensembl, these can be found with the listFilters function.
● Data Source:
BioConductor
● Keywords: methods
● Alias: getGene
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getLDS
(Package: biomaRt) :
Retrieves information from two linked datasets
This function is the main biomaRt query function that links 2 datasets and retrieves information from these linked BioMart datasets. In Ensembl this translates to homology mapping.
● Data Source:
BioConductor
● Keywords: methods
● Alias: getLDS
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providing 
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