R Graphical Manual

Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
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Data Type

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Functions
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Classification

Results 1 - 10 of 27 found.
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sdists.center (Package: cba) : Centroid Sequences

Find centroid sequences among a collection of sequences.

● Data Source: CranContrib
● Keywords: cluster
● Alias: sdists.center
● 0 images

stress (Package: cba) : Conciseness of Presentation Measures

Compute different types of conciseness of presentation measures.

● Data Source: CranContrib
● Keywords: cluster, hplot
● Alias: stress, stress.dist
● 0 images

lmplot (Package: cba) : Plotting Logical Matrices

Implements a wrapper function to image that produces a black and white or gray-scale plot of a logical matrix.

● Data Source: CranContrib
● Keywords: cluster, hplot
● Alias: lmplot
● 0 images

lminter (Package: cba) : Interpolating Logical Matrices

Interpolate a logical matrix into a lower-resolution representation.

● Data Source: CranContrib
● Keywords: cluster, hplot
● Alias: lminter
● 0 images

plot.sdists.graph (Package: cba) : Plotting Edit Transcripts and Sequence Alignments

Function for visualizing the optimal transformation (alignment) graph for two symbol sequences.

● Data Source: CranContrib
● Keywords: cluster
● Alias: plot.sdists.graph
● 0 images

rockCluster (Package: cba) : Rock Clustering

Cluster a data matrix using the Rock algorithm.

● Data Source: CranContrib
● Keywords: cluster
● Alias: rockCluster, rockLink
● 0 images

sdists.center.align (Package: cba) : Align Sequences to a Center

Find a global alignment of a collection of sequences using the center-star-tree heuristic.

● Data Source: CranContrib
● Keywords: cluster
● Alias: sdists.center.align
● 0 images

sdists.trace (Package: cba) : Edit Transcripts and Sequence Alignments

This function computes and returns the set of all optimal but equivalent edit transcripts that transforms one sequences into another at minimum cost, as well as the corresponding aligned sequences, or, alternatively a combined edit graph.

● Data Source: CranContrib
● Keywords: cluster
● Alias: sdists.trace
● 0 images

predict.ccfkms (Package: cba) : Clustering with Conjugate Convex Functions.

Classify the rows of a data matrix using conjugate convex functions.

● Data Source: CranContrib
● Keywords: cluster
● Alias: predict.ccfkms
● 0 images

cut.ordered (Package: cba) : Converting Ordered Factors

Reduce the levels of an ordered factor.

● Data Source: CranContrib
● Keywords: manip
● Alias: cut.ordered
● 0 images