Produces a boxplot, but instead of horizontal bars at the median, the bars are at the midpoint of the shorth.
● Data Source:
BioConductor
● Keywords:
● Alias: BoxPlotShorth
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visualizes significant interactions as a graph
● Data Source:
BioConductor
● Keywords:
● Alias: InteractGraph
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visualizes significant interactions as a levelplot
● Data Source:
BioConductor
● Keywords:
● Alias: InteractLevelPlot
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Plots residuals vs fitted values after fitting of main effects.
● Data Source:
BioConductor
● Keywords: hplot
● Alias: MainFitPlot
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Plots a heatmap of the mean residuals for each interaction pair.
● Data Source:
BioConductor
● Keywords:
● Alias: PlotHeatmap
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Given a vextor of p-values a cumulative p-value plot is produced
● Data Source:
BioConductor
● Keywords:
● Alias: Pplot
●
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cellHTS2df
(Package: coRNAi) :
converts cellHTS objects to dataframes
converts a cellHTS2 object into a data.frame object and check that all mandatory meta data is included. Adds Directions, replicates and Pair columns.
● Data Source:
BioConductor
● Keywords:
● Alias: cellHTS2df
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This is a wrapper function for cor.test, given a matrix of interaction values, correlations and corresponding p-values for the genewise interaction profiles are calculated.
● Data Source:
BioConductor
● Keywords:
● Alias: cortestmatrices
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From a interaction table or list of data matrices a .dot file is created for visualisation of the interaction/correlation network
● Data Source:
BioConductor
● Keywords:
● Alias: data2graph
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The function transforms a float column in a data frame (from cHTS2df) to an array.
● Data Source:
BioConductor
● Keywords:
● Alias: df2array
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providing 
.