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Prepares selected data for QC plots.
● Data Source:
BioConductor
● Keywords:
● Alias: prepDataForQC
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0 images
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Push an object to the list.
● Data Source:
BioConductor
● Keywords:
● Alias: push
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0 images
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remove unnecessary columns
● Data Source:
BioConductor
● Keywords:
● Alias: removeCols
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0 images
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Plot PCA results.
● Data Source:
BioConductor
● Keywords:
● Alias: round_vals
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0 images
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Run DESeq2 algorithm on the selected conditions. Output is to be used for the interactive display.
● Data Source:
BioConductor
● Keywords:
● Alias: runDESeq
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0 images
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Creates a heatmap based on the user selected parameters within shiny.
● Data Source:
BioConductor
● Keywords:
● Alias: runHeatmap
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1 images
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Runs PCA on the selected dataset.
● Data Source:
BioConductor
● Keywords:
● Alias: run_pca
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0 images
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Saves the current QC plot selection to the users local disk.
● Data Source:
BioConductor
● Keywords:
● Alias: saveQCPlot
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0 images
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Displays the zoomed in version of the plot to be viewed within the main panel.
● Data Source:
BioConductor
● Keywords:
● Alias: scatterZoom
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0 images
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Selects user input conditions, multiple if present, to be used in DESeq.
● Data Source:
BioConductor
● Keywords:
● Alias: selectConditions
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0 images
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providing 
.