Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
BioConductor
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Results 1 - 7 of 7 found.
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labels.hclust (Package: dendroextras) : Find labels of hclust object (in dendrogram order)

NB will return labels in dendrogram order, not in the order of the original labels retained in object$labels ususally corresponding to the row or column names of the dist object provided to hclust.
● Data Source: CranContrib
● Keywords:
● Alias: labels.hclust
● 0 images

labels<- (Package: dendroextras) : Set the labels of an object

Set the labels of an object
● Data Source: CranContrib
● Keywords:
● Alias: labels<-, labels<-.dendrogram
● 0 images

dendroextras-package (Package: dendroextras) : Extra functions to cut, label and colour dendrogram clusters

Extra functions to cut, label and colour dendrogram clusters
● Data Source: CranContrib
● Keywords: dendrogram, package,
● Alias: dendroextras, dendroextras-package
● 0 images

colour_clusters (Package: dendroextras) : Colour sub-clusters of a tree (dendrogram/hclust) object

The distinctive feature of this function is to colour both the terminal leaves of a cluster and the edges leading to those leaves. The edgePar attribute of nodes will be augmented by a new list item col. The groups will be defined by a call to slice using the k or h parameters.
● Data Source: CranContrib
● Keywords:
● Alias: color_clusters, colour_clusters
● 0 images

slice (Package: dendroextras) : Cut a tree-like object into groups numbered in tree order

In comparison with cutree, the groups are numbered from left to right as per the tree when plotted in its standard horizontal form. Note also that the return value will have the leaves sorted in dendrogram order.
● Data Source: CranContrib
● Keywords:
● Alias: slice
● 0 images

leaf_colours (Package: dendroextras) : Return the leaf colours of a dendrogram

Return the leaf colours of a dendrogram
● Data Source: CranContrib
● Keywords:
● Alias: leaf_colors, leaf_colours
● 0 images

set_leaf_colours (Package: dendroextras) : Set the leaf colours of a dendrogram

Set the leaf colours of a dendrogram
● Data Source: CranContrib
● Keywords:
● Alias: set_leaf_colors, set_leaf_colours
● 0 images