R Graphical Manual

Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
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Results 1 - 6 of 6 found.
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estParamFlowVS (Package: flowVS) :

This function estimates the variance stabilizing cofactors, one for each channel for the entire dataset. When a fluorescence channel z is transformed by asinh transformation with the optimum cofactor for z, the within-population variances of populations from all samples in the channel z are approximately stabilized.

● Data Source: BioConductor
● Keywords: transformation, variance stabilization
● Alias: estParamFlowVS
● 2 images

flowVS-package (Package: flowVS) :

Please see the vignette.

● Data Source: BioConductor
● Keywords: transformation, variance stabilization
● Alias: flowVS, flowVS-package
● 0 images

lymphs (Package: flowVS) :

Identify and retain lymphocytes from a flow cytometry sample based on the forward and side scatters.

● Data Source: BioConductor
● Keywords: transformation, variance stabilization
● Alias: lymphs
● 1 images

microVS (Package: flowVS) :

Variance-stabilizing inverse hyperbolic sine (asinh) transformation for microarray data.

● Data Source: BioConductor
● Keywords: transformation, variance stabilization
● Alias: microVS
● 2 images

plotMeanSd (Package: flowVS) : Plot row standard deviations versus row means (modified from vsn package)

Plot row standard deviations versus row means of a data matrix.

● Data Source: BioConductor
● Keywords: hplot, methods
● Alias: plotMeanSd
● 2 images

transFlowVS (Package: flowVS) :

This function transforms a flowSet by asinh transformation with the cofactors passed on to the function. The optimum cofactors that stabilize within-population variances in different fluorescence channels are estimated beforehand and passed to this function for data transformation.

● Data Source: BioConductor
● Keywords: transformation, variance stabilization
● Alias: transFlowVS
● 6 images