Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
All

Data Type

Packages
Functions
Images
Data set

Classification

Results 1 - 10 of 73 found.
[1] < 1 2 3 4 5 6 7 8 > [8]  Sort:

clucols (Package: fpc) : Sets of colours and symbols for cluster plotting

clucols gives out a vector of different random colours. clugrey gives out a vector of equidistant grey scales. clusym is a vector of different symbols starting from "1", "2",...
● Data Source: CranContrib
● Keywords: cluster
● Alias: clucols, clugrey, clusym
● 0 images

ncoord (Package: fpc) : Neighborhood based discriminant coordinates

Neighborhood based discriminant coordinates as defined in Hastie and Tibshirani (1996) and a robustified version as defined in Hennig (2003). The principle is to maximize the projection of a between classes covariance matrix, which is defined by averaging the between classes covariance matrices in the neighborhoods of all points.
● Data Source: CranContrib
● Keywords: classif, multivariate
● Alias: ncoord
● 0 images

zmisclassification.matrix (Package: fpc) : Matrix of misclassification probabilities between mixture components

Matrix of misclassification probabilities in a mixture distribution between two mixture components from estimated posterior probabilities regardless of component parameters, see Hennig (2010).
● Data Source: CranContrib
● Keywords: cluster, multivariate
● Alias: zmisclassification.matrix
● 0 images

unimodal.ind (Package: fpc) : Is a fitted denisity unimodal or not?

Checks whether a series of fitted density values (such as given out as y-component of density) is unimodal.
● Data Source: CranContrib
● Keywords: univar
● Alias: unimodal.ind
● 0 images

classifdist (Package: fpc) : Classification of unclustered points

Various methods for classification of unclustered points from clustered points for use within functions nselectboot and prediction.strength.
● Data Source: CranContrib
● Keywords: cluster, multivariate
● Alias: classifdist, classifnp
● 0 images

ridgeline (Package: fpc) : Ridgeline computation

Computes (alpha*Sigma1^-1+(1-alpha)*Sigma2^-1)^-1* alpha*(Sigma1^-1*mu1)+(1-alpha)*(Sigma2^-1*mu2)) as required for the computation of the ridgeline (Ray and Lindsay, 2005) to find all density extrema of a two-component Gaussian mixture with mean vectors mu1 and mu2 and covariance matrices Sigma1, Sigma2.
● Data Source: CranContrib
● Keywords: cluster, multivariate
● Alias: ridgeline
● 0 images

extract.mixturepars (Package: fpc) : Extract parameters for certain components from mclust

Extracts parameter of certain mixture components from the output of summary.mclustBIC and updates proportions so that they sum up to 1.
● Data Source: CranContrib
● Keywords: cluster, multivariate
● Alias: extract.mixturepars
● 0 images

ridgeline.diagnosis (Package: fpc) : Ridgeline plots, ratios and unimodality

Computes ridgeline ratios and unimodality checks for pairs of components given the parameters of a Gaussian mixture. Produces ridgeline plots.
● Data Source: CranContrib
● Keywords: cluster, multivariate
● Alias: ridgeline.diagnosis
● 0 images

bhattacharyya.matrix (Package: fpc) : Matrix of pairwise Bhattacharyya distances

Computes Bhattachryya distances for pairs of components given the parameters of a Gaussian mixture.
● Data Source: CranContrib
● Keywords: cluster, multivariate
● Alias: bhattacharyya.matrix
● 0 images

kmeansCBI (Package: fpc) : Interface functions for clustering methods

These functions provide an interface to several clustering methods implemented in R, for use together with the cluster stability assessment in clusterboot (as parameter clustermethod; "CBI" stands for "clusterboot interface"). In some situations it could make sense to use them to compute a clustering even if you don't want to run clusterboot, because some of the functions contain some additional features (e.g., normal mixture model based clustering of dissimilarity matrices projected into the Euclidean space by MDS or partitioning around medoids with estimated number of clusters, noise/outlier identification in hierarchical clustering).
● Data Source: CranContrib
● Keywords: cluster, multivariate
● Alias: claraCBI, dbscanCBI, disthclustCBI, disthclusttreeCBI, distnoisemclustCBI, disttrimkmeansCBI, hclustCBI, hclusttreeCBI, kmeansCBI, mahalCBI, mergenormCBI, noisemclustCBI, pamkCBI, speccCBI, trimkmeansCBI
● 0 images