iGasso is a collection of statistical tests developed by our group for genetic association studies. So far it contains functions for rare variants association, for association with multiple phenotypes, for linear mixed model analysis, and for model-free association analysis. There is also a function for genome plot. It will keep growing as more tests are developed. Use ?iGasso to see an introduction.
● Data Source:
CranContrib
● Keywords:
● Alias: iGasso, iGasso-package
●
0 images
|
genome.plot plots the value of a variable across the genome.
● Data Source:
CranContrib
● Keywords:
● Alias: genome.plot
●
0 images
|
MFree.test performs tests on association between an SNP and case-control status. It tests whether the frequencies of an allele are the same between cases and controls. It does not require specification of an inheritance model.
● Data Source:
CranContrib
● Keywords:
● Alias: MFree.test
●
0 images
|
SKATlus provides enhanced power over SKAT by properly estimating the null distribution of SKAT.
● Data Source:
CranContrib
● Keywords:
● Alias: SKATplus
●
0 images
|
KAT.coin computes the asymptotic and the approximate conditional p-values for the kernel association test
● Data Source:
CranContrib
● Keywords:
● Alias: KAT.coin
●
0 images
|
VSTF.test performs tests on association between a rare variant and case-control status using a variance-stabilizing transformation.
● Data Source:
CranContrib
● Keywords:
● Alias: VSTF.test
●
0 images
|
providing 
.