R Graphical Manual

Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
All

Data Type

Packages
Functions
Images
Data set

Classification

Results 1 - 10 of 24 found.
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ScatterPlot (Package: metabolomics) : Scatter plot

Produces a scatter plot.

● Data Source: CranContrib
● Keywords:
● Alias: ScatterPlot
● 0 images

VolcanoPlot (Package: metabolomics) : Volcano plot

Produces a volcano plot given fold changes and p-values.

● Data Source: CranContrib
● Keywords:
● Alias: VolcanoPlot
● 0 images

Normalise (Package: metabolomics) : Normalisation

Normalise a metabolomic data matrix according to a specified method.

● Data Source: CranContrib
● Keywords:
● Alias: Normalise
● 0 images

MetBoxPlots (Package: metabolomics) : Box plots of a specified metabolite across groups

Produces box plots of a specified metabolite across groups.

● Data Source: CranContrib
● Keywords:
● Alias: MetBoxPlots
● 0 images

TwoGroup (Package: metabolomics) : Comparing two biological conditions in a metabolomics data matrix

This function computes fold changes, t statistics, p-values, and adjusted p-values for each metabolite given a series of replicates and two biological conditions.

● Data Source: CranContrib
● Keywords:
● Alias: TwoGroup
● 0 images

RlaPlots (Package: metabolomics) : RLA plots

Produces within group and across group relative log abundance plots to visualise a metabolomics data matrix.

● Data Source: CranContrib
● Keywords:
● Alias: RlaPlots
● 0 images

metabolomics-package (Package: metabolomics) : metabolomics package

The metabolomics package is a collection of functions for the analysis of metabolomics data.

● Data Source: CranContrib
● Keywords:
● Alias: metabolomics, metabolomics-package
● 0 images

LogTransform (Package: metabolomics) : Log transformation

Log transform a metabolomics data matrix.

● Data Source: CranContrib
● Keywords:
● Alias: LogTransform
● 0 images

metabdata-class (Package: metabolomics) : Metabolomic data - class

Container for output produced by the LogTransform, MissingValues and Normalise functions in the metabolomics package.

● Data Source: CranContrib
● Keywords:
● Alias: metabdata-class
● 0 images

PcaPlots (Package: metabolomics) : PCA plots

Produces PCA plots.

● Data Source: CranContrib
● Keywords:
● Alias: PcaPlots
● 0 images