R Graphical Manual

Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
BioConductor
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Results 1 - 7 of 7 found.
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greedy (Package: modMax) :

greedy executes the general CNM algorithm and its modifications for modularity maximization.

● Data Source: CranContrib
● Keywords: Analysis of algorithms, Clustering, Community analysis, Community detection, Community discovery, Community structure, Critical phenomena of socio-economic systems, Graph clustering, Modularity, Multilevel, Network dynamics, Network theory, Networks, Random graphs, Randomized algorithm, Social network, Social networking service, Socio-economic networks, rural-urban migration
● Alias: cd, greedy, louvain, mome, msgvm, rgplus, vertexSim
● 0 images

extremalOptimization (Package: modMax) :

extremalOptimization is a function executing the extremal optimization approach and its modifications for calculating modularity and detecting communities (modules of nodes) of a network via modularity maximization

● Data Source: CranContrib
● Keywords: Community, Community structure, Conflict pairwise constraints, Extremal Optimization, Modularity, PCSEO-SS algorithm, Random Local Search Agent, Social Networks, large-scale network
● Alias: extremalOptimization, pcseoss
● 0 images

spectralOptimization (Package: modMax) :

spectralOptimization uses the leading eigenvector to recursively split the communities of a network into two until no further improvement of modularity is possible.

● Data Source: CranContrib
● Keywords: Clustering, Community structure, Complex networks, Eigenspectrum, Metabolic network, Modularity matrix, Modules, Partitioning, Social network, Vector partition approach
● Alias: multiWay, spectral1, spectral2, spectralOptimization
● 0 images

geneticAlgorithm (Package: modMax) :

geneticAlgorithm is a function executing the genetic algorithm and its modifications for identifying the community structure of a network via modularity maximization

● Data Source: CranContrib
● Keywords: Genetic algorithm, Modularity, Network structure, Small-world phenomena
● Alias: geneticAlgorithm
● 0 images

modMax-package (Package: modMax) :

Calcuation of modularity and detection of the community strcture of a given network depicted by an (nonnegative symmetric) adjacency matrix using different modularity maximization algorithms

● Data Source: CranContrib
● Keywords: Clustering, Community detection, Compartmentalization, Graph, Modularity maximization, Network
● Alias: modMax, modMax-package
● 0 images

simulatedAnnealing (Package: modMax) :

The functions presented here are based on simulated annealing and identify the community structure and maximize the modularity. simulatedAnnealing is only based on moving a single vertex from one community to another, while saIndividualCollectiveMoves considers movements of vertices, merging of communities and splitting of communities as alternatives to increase the modularity.

● Data Source: CranContrib
● Keywords: Betweenness, Communality, Networks
● Alias: saIndividualCollectiveMoves, simulatedAnnealing
● 0 images

localModularity (Package: modMax) :

localModularity uses the local modularity to identify the local community structure around a certain vertex

● Data Source: CranContrib
● Keywords: Cache, Community structure, Complex network, Local information, Relative table
● Alias: localModularity, localModularityWang
● 0 images