Last data update: 2014.03.03

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CranContrib
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Results 1 - 10 of 71 found.
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show,fcFilter-method (Package: openCyto) : show method for fcFilter

show method for fcFilter
● Data Source: BioConductor
● Keywords:
● Alias: show,fcFilter-method
● 0 images

show,gatingTemplate-method (Package: openCyto) : show method for gatingTemplate

show method for gatingTemplate
● Data Source: BioConductor
● Keywords:
● Alias: show,gatingTemplate-method
● 0 images

show,gtMethod-method (Package: openCyto) : show method for gtMethod

show method for gtMethod
● Data Source: BioConductor
● Keywords:
● Alias: show,gtMethod-method
● 0 images

tailgate (Package: openCyto) : Gates the tail of a density using the derivative of a kernel density estimate

Gates the tail of a density using the derivative of a kernel density estimate
● Data Source: BioConductor
● Keywords:
● Alias: cytokine, tailgate
● 0 images

templateGen (Package: openCyto) : generate a partially complete csv template from the existing gating hierarchy

To ease the process of replicating the existing (usually a manual one) gating schemes, this function populate an empty gating template with the 'alias', 'pop', 'parent' and 'dims' columns that exacted from an GatingHierarchy, and leave the other columns (e.g. 'gating_method') blank. So users can make changes to that template instead of writing from scratch.
● Data Source: BioConductor
● Keywords:
● Alias: templateGen
● 0 images

add,GatingHierarchy,multipleFilterResult-method (Package: openCyto) : bypass the default flowWorkspace:::.addGate

to support adding gate along with indices without loading flow data and computing
● Data Source: BioConductor
● Keywords:
● Alias: add,GatingHierarchy,logicalFilterResult-method, add,GatingHierarchy,multipleFilterResult-method, add,GatingHierarchy,ocRectRefGate-method, add,GatingHierarchy,ocRectangleGate-method
● 0 images

add_pop (Package: openCyto) : apply a gating method to the code{GatingSet

When interacting with the existing gated data, this function provides the alternative way to interact with he GatingSet by supplying the gating description directly through arguments without the need to write the compelete csv gating template.
● Data Source: BioConductor
● Keywords:
● Alias: add_pop
● 0 images

as.data.table.gatingTemplate (Package: openCyto) : convert a gatingTemplate object to a data.table

It is the inverse function of gatingTemplate constructor.
● Data Source: BioConductor
● Keywords:
● Alias: as.data.table.gatingTemplate
● 0 images

boolMethod-class (Package: openCyto) : A class to represent a boolean gating method.

It extends refGate class.
● Data Source: BioConductor
● Keywords:
● Alias: boolMethod-class
● 0 images

dims,gtMethod-method (Package: openCyto) : get gating method dimensions

get gating method dimensions
● Data Source: BioConductor
● Keywords:
● Alias: dims,gtMethod-method
● 0 images