absMax
(Package: reb) :
Absolute Maxima
Returns the absolute maxima of the input values.
● Data Source:
BioConductor
● Keywords: manip
● Alias: absMax
●
0 images
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buildChromCytoband
(Package: reb) :
Construct a chromLocation object from a cytoband environment
Construct a chromLocation object from a cytoband environment. Human, Rat, and Mouse are currently possible.
● Data Source:
BioConductor
● Keywords: manip
● Alias: buildChromCytoband
●
0 images
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buildChromMap
(Package: reb) :
A function to generate an instantiation of a chromLocation class
This function will take take the name of a data package and build a chromLocation object representing regions of the genomes.
● Data Source:
BioConductor
● Keywords: manip
● Alias: buildChromMap
●
0 images
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This function will summarize gene expression data by cytogenetic band
● Data Source:
BioConductor
● Keywords: manip
● Alias: cset2band
●
2 images
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fromRevIsh
(Package: reb) :
Convert from revish strings to a matrix
This function will convert two lists of revish style strings to a matrix format.
● Data Source:
BioConductor
● Keywords: manip
● Alias: fromRevIsh
●
1 images
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isAbnormal
(Package: reb) :
Is a band 'abnormal'?
Returns 1 or -1 indicating a chromosomal change based upon an input percentage.
● Data Source:
BioConductor
● Keywords: arith
● Alias: isAbnormal
●
0 images
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movbin
(Package: reb) :
movbin
This function analyzes ordered data series to identify regional biases using an moving (running) approximated binomial test.
● Data Source:
BioConductor
● Keywords: manip
● Alias: movbin
●
1 images
|
movt
(Package: reb) :
movt
This function analyzes ordered data series to identify regional biases using an moving (running) approximated t-test.
● Data Source:
BioConductor
● Keywords: manip
● Alias: movt
●
1 images
|
naMean
(Package: reb) :
Wrapper function for the arithmetic mean
Simple call to mean with the na.rm option set to TRUE.
● Data Source:
BioConductor
● Keywords: manip
● Alias: naMean
●
0 images
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regmap
(Package: reb) :
image function wrapper
A simple wrapper around the image function
● Data Source:
BioConductor
● Keywords: manip
● Alias: regmap
●
1 images
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