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Internal functions for the VPC
● Data Source:
CranContrib
● Keywords: methods
● Alias: find.right.table, get.polygon.regions, setup.PPI
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Categorical (visual) predictive check plots.
● Data Source:
CranContrib
● Keywords: methods
● Alias: cat.pc
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Read (repeated) time-to-event simulation data files.
● Data Source:
CranContrib
● Keywords: methods
● Alias: read.TTE.sim.data
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xpose4data-package
(Package: xpose4) :
Xpose database creation and manipulation
Functions used to read in NONMEM table files to an Xpose database and to create and manipulate an Xpose database
● Data Source:
CranContrib
● Keywords: methods, package
● Alias: xpose4data-package
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xpose.VPC
(Package: xpose4) :
Visual Predictive Check (VPC) using XPOSE
This Function is used to create a VPC in xpose using the output from the vpc command in Pearl Speaks NONMEM (PsN). The function reads in the output files created by PsN and creates a plot from the data. The dependent variable, independent variable and conditioning variable are automatically determined from the PsN files.
● Data Source:
CranContrib
● Keywords: methods
● Alias: xpose.VPC
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cwres.vs.cov
(Package: xpose4) :
Conditional Weighted residuals (CWRES) plotted against covariates, for Xpose 4
This creates a stack of plots of conditional weighted residuals (CWRES) plotted against covariates, and is a specific function in Xpose 4. It is a wrapper encapsulating arguments to the xpose.plot.default and xpose.plot.histogram functions. Most of the options take their default values from xpose.data object but may be overridden by supplying them as arguments.
● Data Source:
CranContrib
● Keywords: methods
● Alias: cwres.vs.cov
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change.var.name
(Package: xpose4) :
Changes the name of an Xpose data item
This function allows the names of data items in the Xpose database to be changed.
● Data Source:
CranContrib
● Keywords: methods
● Alias: change.var.name
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dv.vs.ipred.by.cov
(Package: xpose4) :
Dependent variable vs individual predictions, conditioned on
This is a plot of dependent variable (DV) vs individual predictions (IPRED) conditioned by covariates, a specific function in Xpose 4. It is a wrapper encapsulating arguments to the xpose.plot.default function. Most of the options take their default values from xpose.data object but may be overridden by supplying them as arguments.
● Data Source:
CranContrib
● Keywords: methods
● Alias: dv.vs.ipred.by.cov
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This function will generate a plot of individual inclusion indexes for a specific covariate, which can be used to identify influential individuals for inclusion of that covariate. The index for an individual is calculated as the observed number of inclusions of that individual when the specific covariate was included minus the expected number of inclusions (based on the total bootstrap inclusions), divided by expected.
● Data Source:
CranContrib
● Keywords: ~bootgam, ~bootscm
● Alias: xp.incl.index.cov.ind
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functions
(Package: xpose4) :
Data functions for Xpose 4
These functions perform various tasks in managing Xpose data objects.
● Data Source:
CranContrib
● Keywords: methods
● Alias: check.vars, is.readable.file, test.xpose.data, xpose.bin
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providing 
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