ASPBay

Package: ASPBay
Type: Package
Title: Bayesian Inference on Causal Genetic Variants using Affected
Sib-Pairs Data
Depends: hexbin, Rcpp
LinkingTo: Rcpp, RcppArmadillo
Version: 1.2
Date: 2014-12-09
Author: Claire Dandine-Roulland
Maintainer: Claire Dandine-Roulland <claire.Dandine-Roulland@inserm.fr>
Description: This package allows to make inference on the properties of causal genetic
variants in linkage disequilibrium with genotyped markers. In a first step,
we select a subset of variants using a score statistic for affected
sib-pairs. In a second step, on the selected subset, we make
inference on causal genetic variants in the considered region.
License: GPL-2
NeedsCompilation: yes
Packaged: 2015-01-14 14:47:36 UTC; dandine
Repository: CRAN
Date/Publication: 2015-01-14 19:24:22

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ASPBay' ...
** package 'ASPBay' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c MH.cpp -o MH.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o ASPBay.so MH.o RcppExports.o -L/home/ddbj/local/lib64/R/lib -lRlapack -L/home/ddbj/local/lib64/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/ASPBay/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'ASPBay'
    finding HTML links ... done
    ASP.Bayesian                            html  
    ASP.Score                               html  
    ASP.Selection                           html  
    ASPBay-package                          html  
    ASPData                                 html  
    Graphs.Bayesian                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ASPBay)
Making 'packages.html' ... done