BCBCSF

Package: BCBCSF
Version: 1.0-1
Title: Bias-Corrected Bayesian Classification with Selected Features
Author: Longhai Li <longhai@math.usask.ca>
Maintainer: Longhai Li <longhai@math.usask.ca>
Depends: R (>= 2.13.1), abind
Description: Fully Bayesian Classification with a subset of high-dimensional features, such as expression levels of genes. The data are modeled with a hierarchical Bayesian models using heavy-tailed t distributions as priors. When a large number of features are available, one may like to select only a subset of features to use, typically those features strongly correlated with the response in training cases. Such a feature selection procedure is however invalid since the relationship between the response and the features has be exaggerated by feature selection. This package provides a way to avoid this bias and yield better-calibrated predictions for future cases when one uses F-statistic to select features.
License: GPL (>= 2)
URL: http://www.r-project.org
Packaged: 2015-09-25 21:59:35 UTC; longhai
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-09-26 01:05:27

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'BCBCSF' ...
** package 'BCBCSF' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c all.c -o all.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o BCBCSF.so all.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/BCBCSF/libs
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'BCBCSF'
    finding HTML links ... done
    analyzefit                              html  
    data                                    html  
    evalpred                                html  
    example                                 html  
    fitpred                                 html  
    internal                                html  
** building package indices
** testing if installed package can be loaded
* DONE (BCBCSF)
Making 'packages.html' ... done