Last data update: 2014.03.03
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BEDASSLE
Package: BEDASSLE
Type: Package
Title: Quantifies effects of geo/eco distance on genetic
differentiation
Version: 1.5
Date: 2014-12-03
Author: Gideon Bradburd
Maintainer: Gideon Bradburd <gbradburd@ucdavis.edu>
Description: provides functions that allow users to quantify the relative
contributions of geographic and ecological distances to empirical patterns of genetic
differentiation on a landscape. Specifically, we use a custom Markov chain
Monte Carlo (MCMC) algorithm, which is used to estimate the parameters of the
inference model, as well as functions for performing MCMC diagnosis and assessing
model adequacy.
License: GPL (>= 2)
Imports: MASS, matrixcalc, emdbook
Packaged: 2014-12-03 18:25:50 UTC; gburd
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-12-04 00:30:44
Install log
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'BEDASSLE' ...
** package 'BEDASSLE' successfully unpacked and MD5 sums checked
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'BEDASSLE'
finding HTML links ... done
BEDASSLE-internal html
BEDASSLE-package html
Covariance html
HGDP.bedassle.data html
MCMC html
MCMC_BB html
calculate.all.pairwise.Fst html
calculate.pairwise.Fst html
link.up.posteriors html
make.continuing.params html
mcmc.operators html
plot_acceptance_rate html
plot_all_acceptance_rates html
plot_all_joint_marginals html
plot_all_marginals html
plot_all_phi_marginals html
plot_all_phi_trace html
plot_all_trace html
plot_joint_marginal html
plot_marginal html
plot_phi_marginal html
plot_phi_trace html
plot_posterior_predictive_samples html
plot_trace html
posterior.predictive.sample html
** building package indices
** testing if installed package can be loaded
* DONE (BEDASSLE)
Making 'packages.html' ... done
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