Last data update: 2014.03.03

BSgenome.Alyrata.JGI.v1

Package: BSgenome.Alyrata.JGI.v1
Title: Arabidopsis lyrata full genome (JGI version V1.0)
Description: Arabidopsis lyrata 8x Release [project ID 4002920] as provided by JGI ( snapshot from March 24, 2011) and stored in Biostrings objects.
Version: 1.0.0
Author: Jian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel
Maintainer: Jian-Feng Mao <jianfeng.mao@gmail.com>
Depends: BSgenome (>= 1.19.5)
Imports: BSgenome
License: Artistic-2.0
organism: Arabidopsis lyrata
species: Arabidopsis lyrata
provider: JGI (http://www.jgi.doe.gov/) in collaboration with Lab of
Detlef Weigel (http://www.weigelworld.org/)
provider_version: Assembly V1.0
release_date: April 7, 2008
release_name: The Arabidopsis lyrata genome sequence assembly v1.0
source_url: http://gp-edge3.jgi-psf.org:1080/Araly1/Araly1.home.html
biocViews: AnnotationData, Genetics, Alyrata
Packaged: 2011-10-20 22:32:02 UTC; biocadmin

● BiocViews: Alyrata, AnnotationData, Genetics
● 0 images, 1 functions, 0 datasets
● Reverse Depends: 0

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'BSgenome.Alyrata.JGI.v1' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'BSgenome.Alyrata.JGI.v1'
    finding HTML links ... done
    package                                 html  
** building package indices
** testing if installed package can be loaded
* DONE (BSgenome.Alyrata.JGI.v1)
Making 'packages.html' ... done