BayHap

Package: BayHap
Type: Package
Title: Bayesian analysis of haplotype association using Markov Chain
Monte Carlo
Version: 1.0.1
Date: 2013-03-13
Author: Raquel Iniesta and Victor Moreno
Maintainer: Raquel Iniesta <riniesta@pssjd.org>
Description: The package BayHap performs simultaneous estimation of
uncertain haplotype frequencies and association with haplotypes
based on generalized linear models for quantitative, binary and
survival traits. Bayesian statistics and Markov Chain Monte
Carlo techniques are the theoretical framework for the methods
of estimation included in this package. Prior values for model
parameters can be included by the user. Convergence diagnostics
and statistical and graphical analysis of the sampling output
can be also carried out.
Depends: boa
License: GPL (>= 2)
Packaged: 2013-03-13 15:33:49 UTC; riniesta
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2013-03-13 21:25:31

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'BayHap' ...
** package 'BayHap' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c mcmc.c -o mcmc.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o BayHap.so mcmc.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/BayHap/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'BayHap'
    finding HTML links ... done
    BIC                                     html  
    BayHap-internal                         html  
    BayHap-package                          html  
    autocorr                                html  
    bayhapFreq                              html  
    bayhapReg                               html  
    conv.test                               html  
    correl                                  html  
    haplo.prior                             html  
    plotACF                                 html  
    plotDensity                             html  
    plotFreq                                html  
    plotReg                                 html  
    plotRmean                               html  
    plotTrace                               html  
    setupData                               html  
** building package indices
** testing if installed package can be loaded
* DONE (BayHap)
Making 'packages.html' ... done