BiocParallel

Package: BiocParallel
Type: Package
Title: Bioconductor facilities for parallel evaluation
Version: 1.6.2
Authors@R: c(
person("Bioconductor Package Maintainer",
email="maintainer@bioconductor.org", role="cre"),
person("Martin", "Morgan", role="aut"),
person("Valerie", "Obenchain", role="aut"),
person("Michel", "Lang", email="michellang@gmail.com", role="aut"),
person("Ryan", "Thompson", email="rct@thompsonclan.org", role="aut"))
Description: This package provides modified versions and novel
implementation of functions for parallel evaluation, tailored to
use with Bioconductor objects.
URL: https://github.com/Bioconductor/BiocParallel
BugReports: https://github.com/Bioconductor/BiocParallel/issues
biocViews: Infrastructure
License: GPL-2 | GPL-3
Depends: methods
Imports: stats, utils, futile.logger, parallel, snow
Suggests: BiocGenerics, tools, foreach, BatchJobs, BBmisc, doParallel,
Rmpi, GenomicRanges, RNAseqData.HNRNPC.bam.chr14, Rsamtools,
GenomicAlignments, ShortRead, codetools, RUnit, BiocStyle,
knitr
Collate: AllGenerics.R BiocParallelParam-class.R bploop.R
ErrorHandling.R log.R bpbackend-methods.R bpisup-methods.R
bplapply-methods.R bpmapply-methods.R bpiterate-methods.R
bpschedule-methods.R bpstart-methods.R bpstop-methods.R
bpvec-methods.R bpvectorize-methods.R bpworkers-methods.R
bpaggregate-methods.R bpvalidate.R SnowParam-class.R
MulticoreParam-class.R register.R SerialParam-class.R
DoparParam-class.R SnowParam-utils.R BatchJobsParam-class.R
progress.R utilities.R zzz.R
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2016-05-16 03:41:07 UTC; biocbuild
Author: Bioconductor Package Maintainer [cre],
Martin Morgan [aut],
Valerie Obenchain [aut],
Michel Lang [aut],
Ryan Thompson [aut]
Maintainer: Bioconductor Package Maintainer <maintainer@bioconductor.org>

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'BiocParallel' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'BiocParallel'
    finding HTML links ... done
    BatchJobsParam-class                    html  
Rd warning: /tmp/Rtmp5tuO4F/R.INSTALL615b15ffb641/BiocParallel/man/BatchJobsParam-class.Rd:93: missing file link 'ClusterFunctions'
    BiocParallel-package                    html  
    BiocParallelParam-class                 html  
    DoparParam-class                        html  
    MulticoreParam-class                    html  
Rd warning: /tmp/Rtmp5tuO4F/R.INSTALL615b15ffb641/BiocParallel/man/MulticoreParam-class.Rd:218: missing file link 'makeCluster'
    SerialParam-class                       html  
    SnowParam-class                         html  
Rd warning: /tmp/Rtmp5tuO4F/R.INSTALL615b15ffb641/BiocParallel/man/SnowParam-class.Rd:257: missing file link 'makeCluster'
    bpaggregate                             html  
Rd warning: /tmp/Rtmp5tuO4F/R.INSTALL615b15ffb641/BiocParallel/man/bpaggregate.Rd:47: missing file link 'simplify2array'
    bpiterate                               html  
    bplapply                                html  
    bploop                                  html  
    bpmapply                                html  
Rd warning: /tmp/Rtmp5tuO4F/R.INSTALL615b15ffb641/BiocParallel/man/bpmapply.Rd:46: missing file link 'simplify2array'
    bpok                                    html  
    bpschedule                              html  
    bptry                                   html  
    bpvalidate                              html  
    bpvec                                   html  
    bpvectorize                             html  
    register                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (BiocParallel)
Making 'packages.html' ... done