CNprep

Package: CNprep
Type: Package
Title: Pre-process DNA Copy Number (CN) Data for Detection of CN Events
Version: 2.0
Date: 2012-12-06
Author: Alex Krasnitz, Guoli Sun
Maintainer: Guoli Sun <guolisun87@gmail.com>
Description: This package evaluates DNA copy number data, using both their initial form (copy number as a noisy function of genomic position) and their approximation by a piecewise-constant function (segmentation), for the purpose of identifying genomic regions where the copy number differs from the norm.
License: GPL-2
Depends: R (>= 2.10), parallel, mclust, rlecuyer
Packaged: 2014-12-31 17:11:09 UTC; gsun
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-12-31 18:26:36

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'CNprep' ...
** package 'CNprep' successfully unpacked and MD5 sums checked
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'CNprep'
    finding HTML links ... done
    CNpreprocessing                         html  
    annotexample                            html  
    applyCNPmask                            html  
    cnpexample                              html  
    makeCNPmask                             html  
    normsegs                                html  
    ratexample                              html  
    segexample                              html  
** building package indices
** testing if installed package can be loaded
* DONE (CNprep)
Making 'packages.html' ... done